RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ATG7O95352 703 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 DLGAP3O95886 979 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ITGAVP06756 1048 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 NFICP08651 508 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MYL12AP19105 171 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 WEE1P30291 646 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SOX10P56693 466 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SLC39A12Q504Y0 691 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 DPF3Q92784 378 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 PPP1R14AQ96A00 147 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MTMR8Q96EF0 704 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 RMND5BQ96G75 393 aaPredicted RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 AHCYL2Q96HN2 611 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 OLFM1Q99784 485 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MRPS26Q9BYN8 205 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ENTPD4Q9Y227 616 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 TDRKHQ9Y2W6 561 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MON2Q7Z3U7 1717 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 FAM20BO75063 409 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 KCNH1O95259 989 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 LDLRP01130 860 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 POU1F1P28069 291 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SSTR1P30872 391 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MAPK8P45983 427 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 NEK3P51956 506 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 GTF2BQ00403 316 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 NKX2-3Q8TAU0 364 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 WNT8BQ93098 351 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 UBE2E3Q969T4 207 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 FAM136AQ96C01 138 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 TPD52L3Q96J77 140 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 PGLYRP2Q96PD5 576 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 POMKQ9H5K3 350 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SORCS3Q9UPU3 1222 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SEC22BO75396 215 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ATP6V1G2O95670 118 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MLYCDO95822 493 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 PRKCIP41743 596 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 FAM187BQ17R55 369 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 APOBEC3HQ6NTF7 200 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 CASP12Q6UXS9 341 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 PLPPR4Q7Z2D5 763 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 DHFR2Q86XF0 187 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SPPL2AQ8TCT8 520 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 BSNDQ8WZ55 320 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 DLG3Q92796 817 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 HIC2Q96JB3 615 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SLC39A8Q9C0K1 460 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 DNAJC18Q9H819 358 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ANKZF1Q9H8Y5 726 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 KCNMB3Q9NPA1 279 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 DIABLOQ9NR28 239 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MRPL17Q9NRX2 175 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 PSME2Q9UL46 239 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MYOM1P52179 1685 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 GAKO14976 1311 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 E5RJQ4 531 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 INPP4BO15327 924 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 RFX3P48380 749 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ATN1P54259 1190 aaPredicted RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 PCID2Q5JVF3 399 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 FOXR2Q6PJQ5 311 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 CATSPERGQ6ZRH7 1159 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 C11orf74Q86VG3 221 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 POP5Q969H6 163 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SMIM31A0A1B0GVY4 71 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 EML1O00423 815 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 BAIAP3O94812 1187 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 DDNO94850 711 aaPredicted RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 FAM58BPP0C7Q3 252 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ITGB6P18564 788 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 TYMPP19971 482 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ME2P23368 584 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ACAT1P24752 427 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 RPL3P39023 403 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 TOP3AQ13472 1001 aaPredicted RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 SLC9A9Q8IVB4 645 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 ACMSDQ8TDX5 336 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 C2orf49Q9BVC5 232 aaPredicted RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MARCH2Q9P0N8 246 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 TNFSF13BQ9Y275 285 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 PNMA8CA0A1B0GUJ8 204 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 TNFAIP8O95379 198 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 CBWD6Q4V339 395 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 IRAK1BP1Q5VVH5 260 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 C3orf67Q6ZVT6 689 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF655Q8N720 491 aaPredicted RBP6.59□□□□□ -1.36
LSAMP-207ENST00000539563 MAF1Q9H063 256 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 EPB41L4BQ9H329 900 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 CD248Q9HCU0 757 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 PCYOX1Q9UHG3 505 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 DUSP12Q9UNI6 340 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 DERAQ9Y315 318 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 COL1A2P08123 1366 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 A0A0A0MRY4 1105 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 ENO4A6NNW6 628 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 PEX1O43933 1283 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 VAPBO95292 243 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 CYP1A2P05177 515 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms