RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SLC39A11Q8N1S5 342 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 UMODL1-AS1Q8N2C9 162 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 ZNF276Q8N554 614 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 CNTD1Q8N815 330 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 BANPQ8N9N5 519 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 PDZD8Q8NEN9 1154 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 OVCA2Q8WZ82 227 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 TMEM169Q96HH4 297 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 PAIP2Q9BPZ3 127 aaKnown RBP20.85■□□□□ 0.93
DDX55-205ENST00000538744 TMEM248Q9NWD8 314 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 BFARQ9NZS9 450 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 HSFX1Q9UBD0 423 aa20.85■□□□□ 0.93
DDX55-205ENST00000538744 AP3B1O00203 1094 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 CACNG3O60359 315 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 FAM155BO75949 473 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 KRT38O76015 456 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 POLBP06746 335 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 HMBSP08397 361 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 GJA8P48165 433 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 SERPINB9P50453 376 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 PAPOLAP51003 745 aaKnown RBP20.84■□□□□ 0.93
DDX55-205ENST00000538744 NDST2P52849 883 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 LRRC26Q2I0M4 334 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 HHATQ5VTY9 493 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 FBXO46Q6PJ61 603 aaPredicted RBP20.84■□□□□ 0.93
DDX55-205ENST00000538744 KLHDC8BQ8IXV7 354 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 DNAAF3Q8N9W5 541 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 CDKL2Q92772 493 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 OXNAD1Q96HP4 312 aaPredicted RBP20.84■□□□□ 0.93
DDX55-205ENST00000538744 PPP1R2P1Q96PQ5 205 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 CLSTN3Q9BQT9 956 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 HERC2P3Q9BVR0 1158 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 HBS1LQ9Y450 684 aaKnown RBP20.84■□□□□ 0.93
DDX55-205ENST00000538744 ATXN2Q99700 1313 aaKnown RBP20.84■□□□□ 0.93
DDX55-205ENST00000538744 TRIM49D1C9J1S8 452 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 TM9SF1O15321 606 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 USP12O75317 370 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 TIMP1P01033 207 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 DSG1Q02413 1049 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 NAB1Q13506 487 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 OLIG2Q13516 323 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 ANO4Q32M45 955 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 SPANXN3Q5MJ09 141 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 RAP1GAP2Q684P5 730 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 TPGS2Q68CL5 300 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 NAPEPLDQ6IQ20 393 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 MARK2Q7KZI7 788 aaKnown RBP20.84■□□□□ 0.93
DDX55-205ENST00000538744 PIGWQ7Z7B1 504 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 LINC00523Q86TU6 105 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 MTBPQ96DY7 904 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 RC3H2Q9HBD1 1191 aaKnown RBP20.84■□□□□ 0.93
DDX55-205ENST00000538744 GLOD4Q9HC38 313 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 AAR2Q9Y312 384 aaKnown RBP20.84■□□□□ 0.93
DDX55-205ENST00000538744 FAM169AQ9Y6X4 670 aa20.84■□□□□ 0.93
DDX55-205ENST00000538744 CARNS1A5YM72 827 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 GOLGA8RI6L899 631 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 EFCAB14O75071 495 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 ABLIM3O94929 683 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 LAG3P18627 525 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 NPY2RP49146 381 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 DEFB103AP81534 67 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 SLC18A2Q05940 514 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 SLC1A5Q15758 541 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 SEPT7Q16181 437 aaKnown RBP20.83■□□□□ 0.92
DDX55-205ENST00000538744 FAM117BQ6P1L5 589 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 OTOP3Q7RTS5 596 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 TFAP2DQ7Z6R9 452 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 CMTR2Q8IYT2 770 aaKnown RBP20.83■□□□□ 0.92
DDX55-205ENST00000538744 ZNF461Q8TAF7 563 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 ARMC5Q96C12 935 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 APOPT1Q96IL0 206 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 PAWRQ96IZ0 340 aaKnown RBP20.83■□□□□ 0.92
DDX55-205ENST00000538744 SERAC1Q96JX3 654 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 FCRL5Q96RD9 977 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 KLF6Q99612 283 aaPredicted RBP20.83■□□□□ 0.92
DDX55-205ENST00000538744 NOL6Q9H6R4 1146 aaKnown RBP20.83■□□□□ 0.92
DDX55-205ENST00000538744 DNMT3LQ9UJW3 386 aa20.83■□□□□ 0.92
DDX55-205ENST00000538744 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.82■□□□□ 0.92
DDX55-205ENST00000538744 UGT1A9O60656 530 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 ANXA9O76027 345 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 SEC24AO95486 1093 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 CNTFP26441 200 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 NIPAL4Q0D2K0 466 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 BTG3Q14201 252 aaPredicted RBP20.82■□□□□ 0.92
DDX55-205ENST00000538744 SNX30Q5VWJ9 437 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 FBXL22Q6P050 247 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 ZNF449Q6P9G9 518 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 CCDC197Q8NCU1 140 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 CABS1Q96KC9 395 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 ZNF512Q96ME7 567 aaPredicted RBP20.82■□□□□ 0.92
DDX55-205ENST00000538744 UGT1A7Q9HAW7 530 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 UGT1A10Q9HAW8 530 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 UGT1A8Q9HAW9 530 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 FGFR1OP2Q9NVK5 253 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 IPO11Q9UI26 975 aaKnown RBP20.82■□□□□ 0.92
DDX55-205ENST00000538744 MRPL42Q9Y6G3 142 aaKnown RBP20.82■□□□□ 0.92
DDX55-205ENST00000538744 RPS6KL1Q9Y6S9 549 aa20.82■□□□□ 0.92
DDX55-205ENST00000538744 DRGXA6NNA5 263 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 LPXNO60711 386 aa20.81■□□□□ 0.92
DDX55-205ENST00000538744 NEBLO76041 1014 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms