RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 UBE2Q1Q7Z7E8 422 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 SLC22A16Q86VW1 577 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 ZNF34Q8IZ26 560 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 UNC5BQ8IZJ1 945 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 CATSPER1Q8NEC5 780 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 HM13Q8TCT9 377 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 MBOAT7Q96N66 472 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 SLITRK1Q96PX8 696 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 C11orf70Q9BRQ4 267 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 CBWD1Q9BRT8 395 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 PI4K2AQ9BTU6 479 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 CALN1Q9BXU9 219 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 ANKRD60Q9BZ19 345 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 WDR55Q9H6Y2 383 aaPredicted RBP10.91□□□□□ -0.66
RTN3-208ENST00000537981 PARVAQ9NVD7 372 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 THAP1Q9NVV9 213 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 DSEQ9UL01 958 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 AP4E1Q9UPM8 1137 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 PCDHGB7Q9Y5F8 929 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 A0A087WXM4 84 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 FAM149AA5PLN7 773 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 A8MX80 341 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 TAF4O00268 1085 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 SLC26A4O43511 780 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 PROSCO94903 275 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 ARSAP15289 507 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 DSG3P32926 999 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 BASP1P80723 227 aaKnown RBP10.9□□□□□ -0.66
RTN3-208ENST00000537981 SMU1Q2TAY7 513 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.9□□□□□ -0.66
RTN3-208ENST00000537981 TTBK2Q6IQ55 1244 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 CYP2U1Q7Z449 544 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 LDHDQ86WU2 507 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 UNC45BQ8IWX7 931 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 LRRC47Q8N1G4 583 aaKnown RBP10.9□□□□□ -0.66
RTN3-208ENST00000537981 SIX6OS1Q8N1H7 587 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 CYP2W1Q8TAV3 490 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 OSCP1Q8WVF1 389 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 TMA16Q96EY4 203 aaKnown RBP10.9□□□□□ -0.66
RTN3-208ENST00000537981 CEP95Q96GE4 821 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 CDK5RAP1Q96SZ6 601 aaKnown RBP10.9□□□□□ -0.66
RTN3-208ENST00000537981 ATP13A3Q9H7F0 1226 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 DMAC2Q9NW81 257 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 GDAP2Q9NXN4 497 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 DNM3Q9UQ16 869 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 SLC30A1Q9Y6M5 507 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 NUP98P52948 1817 aa10.9□□□□□ -0.66
RTN3-208ENST00000537981 ILVBLA1L0T0 632 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 ZNF701M0R085 212 aaPredicted RBP10.9□□□□□ -0.67
RTN3-208ENST00000537981 TIPRLO75663 272 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 BCL10O95999 233 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 P4HBP07237 508 aaKnown RBP10.9□□□□□ -0.67
RTN3-208ENST00000537981 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 CCNA2P20248 432 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 CCR10P46092 362 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 ZNF132P52740 706 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 PRKAA2P54646 552 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 KRT76Q01546 638 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 PPP1R3AQ16821 1122 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 CDONQ4KMG0 1287 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 TRMT10BQ6PF06 316 aaKnown RBP10.9□□□□□ -0.67
RTN3-208ENST00000537981 BNC2Q6ZN30 1099 aaPredicted RBP10.9□□□□□ -0.67
RTN3-208ENST00000537981 PIGZQ86VD9 579 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 LGI2Q8N0V4 545 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 TP53I13Q8NBR0 393 aaPredicted RBP10.9□□□□□ -0.67
RTN3-208ENST00000537981 BRSK1Q8TDC3 778 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 TRPC4APQ8TEL6 797 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 TFAP2CQ92754 450 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 NPAS2Q99743 824 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 RTKNQ9BST9 563 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 EMILIN2Q9BXX0 1053 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 ZNF358Q9NW07 568 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 FETUBQ9UGM5 382 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 SLCO3A1Q9UIG8 710 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 ZNRF3Q9ULT6 936 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 B3GNT3Q9Y2A9 372 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 MRPS23Q9Y3D9 190 aaKnown RBP10.9□□□□□ -0.67
RTN3-208ENST00000537981 FER1L6Q2WGJ9 1857 aa10.9□□□□□ -0.67
RTN3-208ENST00000537981 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 ERVV-2B6SEH9 535 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 E7ESA3 106 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 H7C0C1 242 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 RGS13O14921 159 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 SPAG6O75602 509 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 ALDH1A2O94788 518 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 KRT1P04264 644 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 CYP3A4P08684 503 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 SPNP16150 400 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 POLD2P49005 469 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 CDKN1CP49918 316 aaPredicted RBP10.89□□□□□ -0.67
RTN3-208ENST00000537981 ELOAQ14241 798 aaKnown RBP10.89□□□□□ -0.67
RTN3-208ENST00000537981 PRR16Q569H4 304 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 MAMDC4Q6UXC1 1216 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 NEK10Q6ZWH5 1172 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 CHSY3Q70JA7 882 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 GLRX5Q86SX6 157 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 C10orf107Q8IVU9 208 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 RHOT1Q8IXI2 618 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 PPIL6Q8IXY8 311 aa10.89□□□□□ -0.67
RTN3-208ENST00000537981 KATNAL2Q8IYT4 538 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms