RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ARL13BQ3SXY8 428 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 LYSMD4Q5XG99 296 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 RWDD4Q6NW29 188 aaKnown RBP13.51□□□□□ -0.25
PRKDC-206ENST00000536429 SLC36A4Q6YBV0 504 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 TMC6Q7Z403 805 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 NLRP14Q86W24 1093 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 DRC7Q8IY82 874 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 STK40Q8N2I9 435 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 KDM1BQ8NB78 822 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 NTAN1Q96AB6 310 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 ZNF653Q96CK0 615 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 HSPA12BQ96MM6 686 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 FAM129BQ96TA1 746 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRKDC-206ENST00000536429 GPR174Q9BXC1 333 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 ZYG11BQ9C0D3 744 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 ISCUQ9H1K1 167 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 RSPH9Q9H1X1 276 aaPredicted RBP13.51□□□□□ -0.25
PRKDC-206ENST00000536429 FSCN3Q9NQT6 498 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 VPS45Q9NRW7 570 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 PARVAQ9NVD7 372 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 TMEM51Q9NW97 253 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 GPATCH2LQ9NWQ4 482 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 ARHGAP20Q9P2F6 1191 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 MYO1AQ9UBC5 1043 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 PPARGC1AQ9UBK2 798 aaKnown RBP13.51□□□□□ -0.25
PRKDC-206ENST00000536429 SERGEFQ9UGK8 458 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 VPS51Q9UID3 782 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 A0A087X0T9 212 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 EDDM13A0A1B0GTR0 161 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 TMEM191CA6NGB0 347 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 MID1O15344 667 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 FAM228BP0C875 321 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 PSMA2P25787 234 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 MAOBP27338 520 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 OR1E1P30953 314 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 ACSL1P33121 698 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 ACVRL1P37023 503 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 ID4P47928 161 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 METAP1P53582 386 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 NRG1Q02297 640 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-206ENST00000536429 SULT2A1Q06520 285 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 ZNF33AQ06730 810 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 SCAPQ12770 1279 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 AASDHQ4L235 1098 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-206ENST00000536429 C6orf118Q5T5N4 469 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 ACBD5Q5T8D3 534 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-206ENST00000536429 DAB2IPQ5VWQ8 1189 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 ZNF776Q68DI1 518 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-206ENST00000536429 LINGO4Q6UY18 593 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 SLFN11Q7Z7L1 901 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 SETD3Q86TU7 594 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-206ENST00000536429 MMAAQ8IVH4 418 aaKnown RBP13.5□□□□□ -0.25
PRKDC-206ENST00000536429 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 ZNF419Q96HQ0 510 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-206ENST00000536429 PEBP4Q96S96 227 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 PILRBQ9UKJ0 227 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 FZD10Q9ULW2 581 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 ACTL7AQ9Y615 435 aa13.5□□□□□ -0.25
PRKDC-206ENST00000536429 THADAQ6YHU6 1953 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 ILVBLA1L0T0 632 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 TARSL2A2RTX5 802 aaKnown RBP13.49□□□□□ -0.25
PRKDC-206ENST00000536429 ANKRD62A6NC57 917 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 CBFA2T2O43439 604 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SMAD6O43541 496 aaKnown RBP13.49□□□□□ -0.25
PRKDC-206ENST00000536429 ATP9BO43861 1147 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 NDUFS2O75306 463 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 ZMPSTE24O75844 475 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 DNTTP04053 509 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SRCP12931 536 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 RHOQP17081 205 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 PSMD8P48556 350 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 IRX4P78413 519 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 DLG2Q15700 870 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 CA9Q16790 459 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SPDYCQ5MJ68 293 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SPECC1LQ69YQ0 1117 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 PPP1R2P3Q6NXS1 205 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 Q6ZVU0 165 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 CYP4V2Q6ZWL3 525 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SYT12Q8IV01 421 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SH2D3CQ8N5H7 860 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 C12orf50Q8NA57 414 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-206ENST00000536429 DCAF4L2Q8NA75 395 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 TBC1D31Q96DN5 1066 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 ARHGEF26Q96DR7 871 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 IQCDQ96DY2 449 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SPON2Q9BUD6 331 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 THAP2Q9H0W7 228 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 PABPC3Q9H361 631 aaKnown RBP13.49□□□□□ -0.25
PRKDC-206ENST00000536429 FBRSQ9HAH7 460 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 DLL3Q9NYJ7 618 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 PCSK1NQ9UHG2 260 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 DNAI1Q9UI46 699 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SLC25A13Q9UJS0 675 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 NENFQ9UMX5 172 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRKDC-206ENST00000536429 BZW2Q9Y6E2 419 aaKnown RBP13.49□□□□□ -0.25
PRKDC-206ENST00000536429 SLCO1B1Q9Y6L6 691 aa13.49□□□□□ -0.25
PRKDC-206ENST00000536429 NUMA1Q14980 2115 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms