RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 USP3Q9Y6I4 520 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 KANSL1LA0AUZ9 987 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 DAB1O75553 588 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 ALDH1A2O94788 518 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 GLRA4Q5JXX5 417 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 Q6ZNX1 250 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 CLEC4CQ8WTT0 213 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 CDKL2Q92772 493 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 E2F7Q96AV8 911 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 UBAP1Q9NZ09 502 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 HES2Q9Y543 173 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 HTR3EA5X5Y0 456 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 SDR42E2A6NKP2 422 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 SPECC1L-ADORA2AF8WAN1 911 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 NOS2P35228 1153 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 XIAPP98170 497 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 PDE1BQ01064 536 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 BTKQ06187 659 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 CCL15Q16663 113 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 TMC7Q7Z402 723 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 DEPDC1BQ8WUY9 529 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 KCTD13Q8WZ19 329 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 GFM2Q969S9 779 aaKnown RBP18.34■□□□□ 0.53
RAB40C-203ENST00000535977 DUSP16Q9BY84 665 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 CDHR5Q9HBB8 845 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 SIRPGQ9P1W8 387 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 GLUD2P49448 558 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 CCR3P51677 355 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 PDK1Q15118 436 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 TLR1Q15399 786 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 TRIP10Q15642 601 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 DNAL1Q4LDG9 190 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 KYAT3Q6YP21 454 aaKnown RBP18.34■□□□□ 0.53
RAB40C-203ENST00000535977 PATL1Q86TB9 770 aaKnown RBP18.34■□□□□ 0.53
RAB40C-203ENST00000535977 STAP1Q9ULZ2 295 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 PCDHGB4Q9UN71 923 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 PCDHGB5Q9Y5G0 923 aa18.34■□□□□ 0.53
RAB40C-203ENST00000535977 MAP3K6O95382 1288 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 COL6A2P12110 1019 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 LMO2P25791 158 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 AIF1P55008 147 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 NUDCD3Q8IVD9 361 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 ADGRF2Q8IZF7 708 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 CCDC185Q8N715 623 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 NT5C3BQ969T7 300 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 GCNAQ96QF7 691 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 SMYD2Q9NRG4 433 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 FAF1Q9UNN5 650 aaPredicted RBP18.33■□□□□ 0.53
RAB40C-203ENST00000535977 PIN4Q9Y237 131 aaKnown RBP18.33■□□□□ 0.53
RAB40C-203ENST00000535977 RAD54BQ9Y620 910 aa18.33■□□□□ 0.53
RAB40C-203ENST00000535977 SULT1E1P49888 294 aa18.33■□□□□ 0.52
RAB40C-203ENST00000535977 FAM110CQ1W6H9 321 aa18.33■□□□□ 0.52
RAB40C-203ENST00000535977 PAOXQ6QHF9 649 aa18.33■□□□□ 0.52
RAB40C-203ENST00000535977 PDZD4Q76G19 769 aaPredicted RBP18.33■□□□□ 0.52
RAB40C-203ENST00000535977 ALDH16A1Q8IZ83 802 aa18.33■□□□□ 0.52
RAB40C-203ENST00000535977 SLC26A7Q8TE54 656 aa18.33■□□□□ 0.52
RAB40C-203ENST00000535977 DQX1Q8TE96 717 aaKnown RBP18.33■□□□□ 0.52
RAB40C-203ENST00000535977 PPARGC1AQ9UBK2 798 aaKnown RBP18.33■□□□□ 0.52
RAB40C-203ENST00000535977 TAGLN3Q9UI15 199 aa18.33■□□□□ 0.52
RAB40C-203ENST00000535977 HEMK1Q9Y5R4 338 aaPredicted RBP18.33■□□□□ 0.52
RAB40C-203ENST00000535977 PDCD11Q14690 1871 aaKnown RBP18.33■□□□□ 0.52
RAB40C-203ENST00000535977 PCNTO95613 3336 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 A0A088AWK7 358 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 ARHGAP10A1A4S6 786 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-203ENST00000535977 ALDH2P05091 517 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 CSH1P0DML2 217 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 CSH2P0DML3 217 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 GOT1P17174 413 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 AKAP5P24588 427 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 PSMD7P51665 324 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 MRPS5P82675 430 aaKnown RBP18.32■□□□□ 0.52
RAB40C-203ENST00000535977 TMPRSS15P98073 1019 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 SNX17Q15036 470 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 CDHR3Q6ZTQ4 885 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 DEFB106AQ8N104 65 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 NDUFAF2Q8N183 169 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 COLGALT1Q8NBJ5 622 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 B3GALNT2Q8NCR0 500 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 ICA1LQ8NDH6 482 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 SLC9A7Q96T83 725 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 PARK7Q99497 189 aaKnown RBP18.32■□□□□ 0.52
RAB40C-203ENST00000535977 MEI4A8MW99 385 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 SERPINB7O75635 380 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 PMLP29590 882 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 HALP42357 657 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 ATXN1P54253 815 aaKnown RBP18.32■□□□□ 0.52
RAB40C-203ENST00000535977 RPL26P61254 145 aaKnown RBP18.32■□□□□ 0.52
RAB40C-203ENST00000535977 ZFRQ96KR1 1074 aaKnown RBP18.32■□□□□ 0.52
RAB40C-203ENST00000535977 LPIN3Q9BQK8 851 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 APOL6Q9BWW8 343 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 SLC13A1Q9BZW2 595 aa18.32■□□□□ 0.52
RAB40C-203ENST00000535977 H3BSA7 217 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 SPTLC1O15269 473 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 MFSD10Q14728 455 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 ADRM1Q16186 407 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 BNIPLQ7Z465 357 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 PIGZQ86VD9 579 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms