RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 LRRC40Q9H9A6 602 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ABI2Q9NYB9 513 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-202ENST00000535906 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 BPTFQ12830 3046 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 C2orf71A6NGG8 1288 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 EOMESO95936 686 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 GM2AP17900 193 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 TMPRSS15P98073 1019 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ZBTB16Q05516 673 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 PDE1CQ14123 709 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-202ENST00000535906 CHI3L2Q15782 390 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 SPANXN3Q5MJ09 141 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 SDHAF4Q5VUM1 108 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 OTOP3Q7RTS5 596 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ARHGAP12Q8IWW6 846 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 COLGALT2Q8IYK4 626 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 USP33Q8TEY7 942 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 E2F7Q96AV8 911 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ZNF669Q96BR6 464 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ZNF419Q96HQ0 510 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-202ENST00000535906 NSL1Q96IY1 281 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 GLT1D1Q96MS3 346 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 C7orf26Q96N11 449 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 HAPLN3Q96S86 360 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 VAT1Q99536 393 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 MIPEPQ99797 713 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 C20orf27Q9GZN8 174 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 SMOC2Q9H3U7 446 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 NDFIP2Q9NV92 336 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ARL8BQ9NVJ2 186 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 OSER1Q9NX31 292 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 BFARQ9NZS9 450 aa13.66□□□□□ -0.22
VPS33B-202ENST00000535906 NKX1-2Q9UD57 310 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-202ENST00000535906 ZCWPW2A0A1B0GU75 182 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ARHGEF37A1IGU5 675 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ERI2A8K979 691 aaKnown RBP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 DFFAO00273 331 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ATP9BO43861 1147 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 GSRP00390 522 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 BPGMP07738 259 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 F7P08709 466 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 MYL2P10916 166 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 CCR1P32246 355 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 CYP2C18P33260 490 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 OR1G1P47890 313 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 IRX4P78413 519 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 NAB1Q13506 487 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 KRT72Q14CN4 511 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 NOMO2Q5JPE7 1267 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 BRMS1LQ5PSV4 323 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 FAM91A1Q658Y4 838 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ATG16L1Q676U5 607 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ITPRIPL1Q6GPH6 555 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 C16orf46Q6P387 395 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 MFSD3Q96ES6 412 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 HHIPL1Q96JK4 782 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 FCRL2Q96LA5 508 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 FBXO6Q9NRD1 293 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 EMCNQ9ULC0 261 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 PRG3Q9Y2Y8 225 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 FAM237BA0A1B0GVD1 139 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 A0A1W2PQH9 124 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 TPH1P17752 444 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 GNAZP19086 355 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 GPR15P49685 360 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 MANEALQ5VSG8 457 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ENDOVQ8N8Q3 282 aaKnown RBP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 RAB3IL1Q8TBN0 382 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ACMSDQ8TDX5 336 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ZNF570Q96NI8 536 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ANKRD27Q96NW4 1050 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 AGAP2Q99490 1192 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 CADM1Q9BY67 442 aaKnown RBP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 ZCWPW1Q9H0M4 648 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 DENND2DQ9H6A0 471 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-202ENST00000535906 CHRAC1Q9NRG0 131 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 TBC1D13Q9NVG8 400 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 SRRDQ9UH36 339 aa13.65□□□□□ -0.22
VPS33B-202ENST00000535906 USP1O94782 785 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 OAZ2O95190 189 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 TPBGLP0DKB5 382 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 GMPRP36959 345 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 GP5P40197 560 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 CLNS1AP54105 237 aaKnown RBP13.64□□□□□ -0.23
VPS33B-202ENST00000535906 FAM189BP81408 668 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 PDE1BQ01064 536 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 OCRLQ01968 901 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 DDR2Q16832 855 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 ANKRD20A4Q4UJ75 823 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 PPM1JQ5JR12 505 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 ZCCHC23Q6ZST2 131 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 SPATA22Q8NHS9 363 aa13.64□□□□□ -0.23
VPS33B-202ENST00000535906 NUDCD1Q96RS6 583 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms