RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 CD93Q9NPY3 652 aa13.47□□□□□ -0.25
CHFR-210ENST00000535527 IP6K2Q9UHH9 426 aa13.47□□□□□ -0.25
CHFR-210ENST00000535527 ANGPTL2Q9UKU9 493 aa13.47□□□□□ -0.25
CHFR-210ENST00000535527 TBC1D30Q9Y2I9 924 aa13.47□□□□□ -0.25
CHFR-210ENST00000535527 STARD13Q9Y3M8 1113 aa13.47□□□□□ -0.25
CHFR-210ENST00000535527 RAD54BQ9Y620 910 aa13.47□□□□□ -0.25
CHFR-210ENST00000535527 ADGRG1Q9Y653 693 aa13.47□□□□□ -0.25
CHFR-210ENST00000535527 SPAG17Q6Q759 2223 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.46□□□□□ -0.25
CHFR-210ENST00000535527 A0A1W2PQF6 199 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 TBC1D3BA6NDS4 549 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 CHURC1-FNTBB4DL54 471 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 CREB3O43889 395 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 KLF8O95600 359 aaPredicted RBP13.46□□□□□ -0.25
CHFR-210ENST00000535527 CD160O95971 181 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 HLA-EP13747 358 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 IL4RP24394 825 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 ACVRL1P37023 503 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 CDH4P55283 916 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 GSDMDP57764 484 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 CDH18Q13634 790 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 DPYSQ14117 519 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 LRRC32Q14392 662 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 PIGHQ14442 188 aaPredicted RBP13.46□□□□□ -0.25
CHFR-210ENST00000535527 ZNF234Q14588 700 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 DPYSL2Q16555 572 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 EFHC2Q5JST6 749 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 RABGAP1LQ5R372 815 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 C1orf228Q6PIY5 440 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 ZNF513Q8N8E2 541 aaPredicted RBP13.46□□□□□ -0.25
CHFR-210ENST00000535527 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 FAM71BQ8TC56 605 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 VOPP1Q96AW1 172 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 HHIPQ96QV1 700 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 DDX50Q9BQ39 737 aaKnown RBP13.46□□□□□ -0.25
CHFR-210ENST00000535527 ZYG11BQ9C0D3 744 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 SLC6A17Q9H1V8 727 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.46□□□□□ -0.25
CHFR-210ENST00000535527 CWC15Q9P013 229 aaKnown RBP13.46□□□□□ -0.25
CHFR-210ENST00000535527 PPARGC1AQ9UBK2 798 aaKnown RBP13.46□□□□□ -0.25
CHFR-210ENST00000535527 SLC12A6Q9UHW9 1150 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.46□□□□□ -0.25
CHFR-210ENST00000535527 CAPN6Q9Y6Q1 641 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 FAM208BQ5VWN6 2430 aa13.46□□□□□ -0.25
CHFR-210ENST00000535527 DOCK9Q9BZ29 2069 aa13.46□□□□□ -0.26
CHFR-210ENST00000535527 GRID2IPA4D2P6 1211 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 C3orf70A6NLC5 250 aaPredicted RBP13.45□□□□□ -0.26
CHFR-210ENST00000535527 H0Y626 953 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 MYO1FO00160 1098 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 RNF103O00237 685 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 ZMPSTE24O75844 475 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 VAV1P15498 845 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 COMTP21964 271 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 MAN1A1P33908 653 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 TNFRSF4P43489 277 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 PXNP49023 591 aaPredicted RBP13.45□□□□□ -0.26
CHFR-210ENST00000535527 SHC2P98077 582 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 CSRP2Q16527 193 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 FAM182AQ5T1J6 154 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 ERMARDQ5T6L9 678 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 TTC39BQ5VTQ0 682 aaPredicted RBP13.45□□□□□ -0.26
CHFR-210ENST00000535527 RNF219Q5W0B1 726 aaPredicted RBP13.45□□□□□ -0.26
CHFR-210ENST00000535527 ARHGAP12Q8IWW6 846 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 RHOT2Q8IXI1 618 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 SPEM1Q8N4L4 309 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 LRRC57Q8N9N7 239 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 HSPH1Q92598 858 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 KRT35Q92764 455 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 TTC17Q96AE7 1141 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 HERPUD2Q9BSE4 406 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 CIPCQ9C0C6 399 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 ELOVL2Q9NXB9 296 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 THAP10Q9P2Z0 257 aaPredicted RBP13.45□□□□□ -0.26
CHFR-210ENST00000535527 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 MMP17Q9ULZ9 603 aa13.45□□□□□ -0.26
CHFR-210ENST00000535527 TP53BP1Q12888 1972 aaPredicted RBP13.44□□□□□ -0.26
CHFR-210ENST00000535527 A0A0A6YYK5 440 aaPredicted RBP13.44□□□□□ -0.26
CHFR-210ENST00000535527 DCLK1O15075 740 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 PRPSAP2O60256 369 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 CLDN11O75508 207 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 RNF8O76064 485 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 MOCS3O95396 460 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 MT-CO1P00395 513 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 RHOQP17081 205 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 PLK1P53350 603 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 ARF5P84085 180 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 AMPD2Q01433 879 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 DPYSL3Q14195 570 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 DMC1Q14565 340 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 ACAP1Q15027 740 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 SPA17Q15506 151 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 ARL13BQ3SXY8 428 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
CHFR-210ENST00000535527 RWDD4Q6NW29 188 aaKnown RBP13.44□□□□□ -0.26
CHFR-210ENST00000535527 ARHGAP36Q6ZRI8 547 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 PRR23CQ6ZRP0 262 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 RFX8Q6ZV50 586 aa13.44□□□□□ -0.26
CHFR-210ENST00000535527 POLNQ7Z5Q5 900 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms