RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 IL12RB1P42701 662 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 ZNF135P52742 658 aaPredicted RBP13.46□□□□□ -0.25
TMEM258-202ENST00000535042 SATB1Q01826 763 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 ENPP2Q13822 863 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 PDK2Q15119 407 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 NT5DC3Q86UY8 548 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 TP53INP2Q8IXH6 220 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 MAML2Q8IZL2 1156 aaPredicted RBP13.46□□□□□ -0.25
TMEM258-202ENST00000535042 UMODL1-AS1Q8N2C9 162 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 RNF10Q8N5U6 811 aaKnown RBP13.46□□□□□ -0.25
TMEM258-202ENST00000535042 NPWQ8N729 165 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 PCDH19Q8TAB3 1148 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 UCMAQ8WVF2 138 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 ARHGEF2Q92974 986 aaKnown RBP13.46□□□□□ -0.25
TMEM258-202ENST00000535042 RNF25Q96BH1 459 aaPredicted RBP13.46□□□□□ -0.25
TMEM258-202ENST00000535042 SPON2Q9BUD6 331 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 TSGA10Q9BZW7 698 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 MUC3BQ9H195 1237 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 LZTFL1Q9NQ48 299 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 SPATA6Q9NWH7 488 aaPredicted RBP13.46□□□□□ -0.25
TMEM258-202ENST00000535042 VPS28Q9UK41 221 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 ERVW-1Q9UQF0 538 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 STON1Q9Y6Q2 735 aa13.46□□□□□ -0.25
TMEM258-202ENST00000535042 LRRD1A4D1F6 860 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 PSTPIP1O43586 416 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 KRT86O43790 486 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 RAMP2O60895 175 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ZMPSTE24O75844 475 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 KRT1P04264 644 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ATP5BP06576 529 aaKnown RBP13.45□□□□□ -0.26
TMEM258-202ENST00000535042 COL9A1P20849 921 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 PRKCHP24723 683 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 NTSR1P30989 418 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 STK19P49842 368 aaPredicted RBP13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ECT2LQ008S8 904 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 IFI16Q16666 785 aaKnown RBP13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ZFYVE27Q5T4F4 411 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 AFMIDQ63HM1 303 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ZNF783Q6ZMS7 281 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 SYT13Q7L8C5 426 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ARHGAP12Q8IWW6 846 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 REXO1L1PQ8IX06 675 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 CHPFQ8IZ52 775 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 PQLC3Q8N755 202 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ZNF366Q8N895 744 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 DCAF4L2Q8NA75 395 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 CCDC26Q8TAB7 109 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 FAF2Q96CS3 445 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ERLEC1Q96DZ1 483 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 HMCESQ96FZ2 354 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 CELF6Q96J87 481 aaKnown RBP13.45□□□□□ -0.26
TMEM258-202ENST00000535042 RPL10LQ96L21 214 aaKnown RBP13.45□□□□□ -0.26
TMEM258-202ENST00000535042 GABRG3Q99928 467 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ZNF670Q9BS34 389 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 IER2Q9BTL4 223 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 CALN1Q9BXU9 219 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ACE2Q9BYF1 805 aaPredicted RBP13.45□□□□□ -0.26
TMEM258-202ENST00000535042 SLC39A8Q9C0K1 460 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 MAGEH1Q9H213 219 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 TMEM245Q9H330 911 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 MTG2Q9H4K7 406 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 LRRC19Q9H756 370 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 CD248Q9HCU0 757 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ATP13A1Q9HD20 1204 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 RCOR3Q9P2K3 495 aaPredicted RBP13.45□□□□□ -0.26
TMEM258-202ENST00000535042 VPS51Q9UID3 782 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 SLCO3A1Q9UIG8 710 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 PYCARDQ9ULZ3 195 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 MMP17Q9ULZ9 603 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ACTL7AQ9Y615 435 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 RAD54BQ9Y620 910 aa13.45□□□□□ -0.26
TMEM258-202ENST00000535042 ZDBF2Q9HCK1 2354 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 A0A1W2PQF6 199 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 RASA4BC9J798 803 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 K7ESF4 209 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 RASA4O43374 803 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 ATG13O75143 517 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 FTCDO95954 541 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 CD160O95971 181 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 MT-CO1P00395 513 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 ASLP04424 464 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 HLA-EP13747 358 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 CTNNA2P26232 953 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 CTNNA1P35221 906 aaKnown RBP13.44□□□□□ -0.26
TMEM258-202ENST00000535042 CXCL12P48061 93 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 PEX5P50542 639 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 YBEYP58557 167 aaPredicted RBP13.44□□□□□ -0.26
TMEM258-202ENST00000535042 ARF5P84085 180 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 POLD3Q15054 466 aaPredicted RBP13.44□□□□□ -0.26
TMEM258-202ENST00000535042 HSF5Q4G112 596 aaPredicted RBP13.44□□□□□ -0.26
TMEM258-202ENST00000535042 ANKRD20A8PQ5CZ79 823 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 KIAA1211LQ6NV74 962 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 TSSK4Q6SA08 328 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 MFSD7Q6UXD7 560 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 LINGO4Q6UY18 593 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 C1orf210Q8IVY1 113 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 MAP7D3Q8IWC1 876 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 ALG3Q92685 438 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms