RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 APOBEC2Q9Y235 224 aaKnown RBP3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 SLCO1B1Q9Y6L6 691 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 ITPR2Q14571 2701 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 KNL1Q8NG31 2342 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 PLXNB3Q9ULL4 1909 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 POLQO75417 2590 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 CSMD1Q96PZ7 3565 aa3.22□□□□□ -1.89
CHMP4A-208ENST00000534106 USP9YO00507 2555 aaPredicted RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 SETD2Q9BYW2 2564 aaPredicted RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 GREB1Q4ZG55 1949 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 A0A087X1B8 175 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TCRBV21S2A2A0A5A6 115 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 LRRIQ4A6NIV6 560 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TMEM189-UBE2V1I3L0A0 370 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 CCER2I3L3R5 266 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 PPEF2O14830 753 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 SMAD7O15105 426 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TRAPPC3O43617 180 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 LARGE1O95461 756 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 LTFP02788 710 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF888P0CJ79 500 aaPredicted RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 MYF5P13349 255 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 CPA1P15085 419 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 GSPT1P15170 499 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ATF6P18850 670 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 CHMLP26374 656 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 MARCKSP29966 332 aaPredicted RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ADSSP30520 456 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 MCM5P33992 734 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 OPRD1P41143 372 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 LIFRP42702 1097 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ALDH1A3P47895 512 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 IRX6P78412 446 aaPredicted RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ZXDBP98169 803 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 EXOSC10Q01780 885 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TLE3Q04726 772 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 DPTQ07507 201 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 GRIK2Q13002 908 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TARDBPQ13148 414 aaKnown RBP eCLIP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 PLD1Q13393 1074 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 PRPF4BQ13523 1007 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TFDP1Q14186 410 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 MXD4Q14582 209 aaPredicted RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 PTPAQ15257 358 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 PFKFB3Q16875 520 aaPredicted RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 HLA-BQ31612 363 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ARHGAP15Q53QZ3 475 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ZMAT1Q5H9K5 638 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 KCNT1Q5JUK3 1230 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 KIAA1614Q5VZ46 1190 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 NCAPH2Q6IBW4 605 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 APOA5Q6Q788 366 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ALKAL1Q6UXT8 129 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 USP49Q70CQ1 688 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 DPH6Q7L8W6 267 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 POLNQ7Z5Q5 900 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 NOP9Q86U38 636 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 LRRTM3Q86VH5 581 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TICAM2Q86XR7 235 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 EFCAB13Q8IY85 973 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TMTC2Q8N394 836 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 IL17RCQ8NAC3 791 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 LSM14AQ8ND56 463 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 BEST2Q8NFU1 509 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 RDM1Q8NG50 284 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 CEP76Q8TAP6 659 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TCP11Q8WWU5 503 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 HAS1Q92839 578 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ACOX2Q99424 681 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 KCNJ15Q99712 375 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 LXNQ9BS40 222 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 IKZF4Q9H2S9 585 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 GAREM1Q9H706 876 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 TRPC7Q9HCX4 862 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 C6orf50Q9HD87 102 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 KCND1Q9NSA2 647 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 OBP2AQ9NY56 170 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 HSPBP1Q9NZL4 362 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 ANKMY1Q9P2S6 941 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 PPARGC1AQ9UBK2 798 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 RBM8AQ9Y5S9 174 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 AKAP9Q99996 3911 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 KNTC1P50748 2209 aa3.21□□□□□ -1.9
CHMP4A-208ENST00000534106 COL4A2P08572 1712 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 DOPEY2Q9Y3R5 2298 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CYP3A7-CYP3A51PA0A087WV96 503 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 IGHV1OR15-9A0A0B4J2B8 117 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 KLF18A0A0U1RQI7 1052 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 A0A1B0GVT2 93 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ESYT3A0FGR9 886 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 MTMR11A4FU01 709 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 GOLGA8AA7E2F4 631 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 GOLGA8BA8MQT2 603 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 B2RBV5 119 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 BTBD18B2RXH4 712 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 WASH3PC4AMC7 463 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 HIP1O00291 1037 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SYN3O14994 580 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ZBTB43O43298 467 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms