RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	MLYCD	O95822	493 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	ADRB2	P07550	413 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	POR	P16435	677 aa	Predicted RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	ABCD3	P28288	659 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	MAPK4	P31152	587 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	CCT4	P50991	539 aa	Known RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	ALDH18A1	P54886	795 aa	Known RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	NSUN2	Q08J23	767 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	CDC16	Q13042	620 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	EIF4A2	Q14240	407 aa	Known RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	PXDC1	Q5TGL8	231 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	MANEAL	Q5VSG8	457 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	TMEM65	Q6PI78	240 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	VSTM1	Q6UX27	236 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	RANBP10	Q6VN20	620 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	RRAGA	Q7L523	313 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	R3HCC1L	Q7Z5L2	792 aa	Known RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	CCDC28A	Q8IWP9	274 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	PRSS3P2	Q8NHM4	247 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	TBC1D22A	Q8WUA7	517 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	GOLGA1	Q92805	767 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	RNF125	Q96EQ8	232 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	VPS50	Q96JG6	964 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	FAM227B	Q96M60	508 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	VPS16	Q9H269	839 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	NOD2	Q9HC29	1040 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	ADD3	Q9UEY8	706 aa	Known RBP	5.07	□□□□□ -1.6
ATM-223	ENST00000533979	ABCA10	Q8WWZ4	1543 aa		5.07	□□□□□ -1.6
ATM-223	ENST00000533979	COL15A1	P39059	1388 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	CLSPN	Q9HAW4	1339 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	BIVM-ERCC5	R4GMW8	1640 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979		E5RJQ4	531 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	MTA2	O94776	668 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	APOA4	P06727	396 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	ACADM	P11310	421 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	IL11	P20809	199 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	HOXC13	P31276	330 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	NR4A2	P43354	598 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	GHRHR	Q02643	423 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	GALNT2	Q10471	571 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	ACVR2B	Q13705	512 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	LAMB3	Q13751	1172 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	CLCA4	Q14CN2	919 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	LARS2	Q15031	903 aa	Known RBP	5.06	□□□□□ -1.6
ATM-223	ENST00000533979	ANKRD1	Q15327	319 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	BAK1	Q16611	211 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	ST3GAL2	Q16842	350 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	RILPL1	Q5EBL4	403 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	TTC22	Q5TAA0	569 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	RAB11FIP2	Q7L804	512 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	UBE2Q1	Q7Z7E8	422 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	ARMC8	Q8IUR7	673 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	CNGA4	Q8IV77	575 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.06	□□□□□ -1.6
ATM-223	ENST00000533979	TEX11	Q8IYF3	940 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	ZNF713	Q8N859	430 aa	Predicted RBP	5.06	□□□□□ -1.6
ATM-223	ENST00000533979	FAM71D	Q8N9W8	422 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	PIGO	Q8TEQ8	1089 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	ATP2A3	Q93084	1043 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	VMP1	Q96GC9	406 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	WDYHV1	Q96HA8	205 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	NAF1	Q96HR8	494 aa	Known RBP	5.06	□□□□□ -1.6
ATM-223	ENST00000533979	KAZALD1	Q96I82	304 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	EFHD1	Q9BUP0	239 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	DNAJB11	Q9UBS4	358 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	DAPP1	Q9UN19	280 aa		5.06	□□□□□ -1.6
ATM-223	ENST00000533979	RRP7A	Q9Y3A4	280 aa	Known RBP	5.06	□□□□□ -1.6
ATM-223	ENST00000533979	CFAP43	Q8NDM7	1665 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	SPATA31A1	Q5TZJ5	1347 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	5.05	□□□□□ -1.6
ATM-223	ENST00000533979	hCG_1807616	A0A1W2PRN6	198 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	CLIC1	O00299	241 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	NTSR2	O95665	410 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	MST1	P26927	711 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	MLH1	P40692	756 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	ARHGAP25	P42331	645 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	CLK1	P49759	484 aa	Known RBP	5.05	□□□□□ -1.6
ATM-223	ENST00000533979	PLIN5	Q00G26	463 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	WTAP	Q15007	396 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	TWIST1	Q15672	202 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	TRIM60	Q495X7	471 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	CTXN3	Q4LDR2	81 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	MRNIP	Q6NTE8	343 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	RPUSD3	Q6P087	351 aa	Known RBP	5.05	□□□□□ -1.6
ATM-223	ENST00000533979	DCDC5	Q6ZRR9	648 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	VSIG1	Q86XK7	387 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	GALNT13	Q8IUC8	556 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	METTL25	Q8N6Q8	603 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	C11orf44	Q8N8P7	122 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	PNPLA1	Q8N8W4	532 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	USP38	Q8NB14	1042 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	C16orf52	Q8NHV5	167 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	RSPH1	Q8WYR4	309 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	COQ8B	Q96D53	544 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	EDC3	Q96F86	508 aa	Known RBP	5.05	□□□□□ -1.6
ATM-223	ENST00000533979	HMCES	Q96FZ2	354 aa		5.05	□□□□□ -1.6
ATM-223	ENST00000533979	CDHR1	Q96JP9	859 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms