RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 MOCS3O95396 460 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 NR3C1P04150 777 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 ITGB2P05107 769 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 GP1BBP13224 206 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 VAV1P15498 845 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 PDCP20941 246 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 GCLMP48507 274 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 STK19P49842 368 aaPredicted RBP8.05□□□□□ -1.12
NXF1-215ENST00000533440 VAMP7P51809 220 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 TBX4P57082 545 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 DAOAP59103 153 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 TAS2R38P59533 333 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 NFKB2Q00653 900 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 ENPEPQ07075 957 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 ADIGQ0VDE8 80 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 CNTN1Q12860 1018 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 STK4Q13043 487 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 CUL4BQ13620 913 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 CDH18Q13634 790 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 ZSCAN23Q3MJ62 389 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 POM121L1PQ3SYA9 428 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 DCAF6Q58WW2 860 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 MS4A13Q5J8X5 152 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 FAM46CQ5VWP2 391 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 RNF219Q5W0B1 726 aaPredicted RBP8.05□□□□□ -1.12
NXF1-215ENST00000533440 APCDD1Q8J025 514 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 ARL14Q8N4G2 192 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 LINC00301Q8NCQ3 95 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 KIAA0895Q8NCT3 520 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 OR13H1Q8NG92 308 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 TPCN2Q8NHX9 752 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 WDR36Q8NI36 951 aaKnown RBP8.05□□□□□ -1.12
NXF1-215ENST00000533440 KCTD13Q8WZ19 329 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 TATDN2Q93075 761 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 IPO9Q96P70 1041 aaKnown RBP8.05□□□□□ -1.12
NXF1-215ENST00000533440 DDX50Q9BQ39 737 aaKnown RBP8.05□□□□□ -1.12
NXF1-215ENST00000533440 PREBQ9HCU5 417 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 CNGB3Q9NQW8 809 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 EVA1BQ9NVM1 165 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 TSPAN16Q9UKR8 245 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 FRMD4BQ9Y2L6 1034 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 TDRD6O60522 2096 aaKnown RBP8.05□□□□□ -1.12
NXF1-215ENST00000533440 KIF26BQ2KJY2 2108 aa8.05□□□□□ -1.12
NXF1-215ENST00000533440 EME2A4GXA9 379 aaPredicted RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 SLC31A1O15431 190 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 KLRC4O43908 158 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 NOBOXO60393 691 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 PPP6R2O75170 966 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 TCEA3O75764 348 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 NEBLO76041 1014 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 TNFSF15O95150 251 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 ITGA2BP08514 1039 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 TRIM49P0CI25 452 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 TRIM49CP0CI26 452 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 SFTPCP11686 197 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 NNMTP40261 264 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 INHBCP55103 352 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 MCCD1P59942 119 aaPredicted RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 BST2Q10589 180 aaKnown RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 CUL4AQ13619 759 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 SLC12A1Q13621 1099 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 UBAP2LQ14157 1087 aaKnown RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 GOLGA7BQ2TAP0 167 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 CEP135Q66GS9 1140 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 ZCCHC8Q6NZY4 707 aaKnown RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 NEK5Q6P3R8 708 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 SHC4Q6S5L8 630 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 GCNT7Q6ZNI0 430 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 RBM44Q6ZP01 1051 aaKnown RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 ABI3BPQ7Z7G0 1075 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 DSG4Q86SJ6 1040 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 CCDC117Q8IWD4 279 aaPredicted RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 SLC22A18ASQ8N1D0 253 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 SIX6OS1Q8N1H7 587 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 CFAP52Q8N1V2 620 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 CCDC150Q8NCX0 1101 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 OR8D1Q8WZ84 308 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 IRGQQ8WZA9 623 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 EXTL1Q92935 676 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 SGF29Q96ES7 293 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 SLC39A13Q96H72 371 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 FCRL2Q96LA5 508 aaPredicted RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 NOX5Q96PH1 765 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 NUCKS1Q9H1E3 243 aaKnown RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 TMEM8AQ9HCN3 771 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 GPR27Q9NS67 375 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.04□□□□□ -1.12
NXF1-215ENST00000533440 NCKIPSDQ9NZQ3 722 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 PPM1HQ9ULR3 514 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 CEP83Q9Y592 693 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 CSNK1G3Q9Y6M4 447 aa8.04□□□□□ -1.12
NXF1-215ENST00000533440 USP9YO00507 2555 aaPredicted RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 RP1P56715 2156 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 CCDC187A0A096LP49 1063 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.03□□□□□ -1.12
NXF1-215ENST00000533440 A0A1W2PQU0 124 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 CLEC18AA5D8T8 446 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 MCF2LO15068 1137 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 SPTLC2O15270 562 aa8.03□□□□□ -1.12
NXF1-215ENST00000533440 ALOX15BO15296 676 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms