RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ARRDC1-AS1Q9H2J1 176 aa10.11□□□□□ -0.79
NUP98-220ENST00000533346 MRPL47Q9HD33 250 aaKnown RBP10.11□□□□□ -0.79
NUP98-220ENST00000533346 SEPT11Q9NVA2 429 aaKnown RBP10.11□□□□□ -0.79
NUP98-220ENST00000533346 TMEM248Q9NWD8 314 aa10.11□□□□□ -0.79
NUP98-220ENST00000533346 ADAMTS1Q9UHI8 967 aa10.11□□□□□ -0.79
NUP98-220ENST00000533346 PILRBQ9UKJ0 227 aa10.11□□□□□ -0.79
NUP98-220ENST00000533346 SCINQ9Y6U3 715 aa10.11□□□□□ -0.79
NUP98-220ENST00000533346 GPR179Q6PRD1 2367 aa10.11□□□□□ -0.79
NUP98-220ENST00000533346 EP300Q09472 2414 aaPredicted RBP10.1□□□□□ -0.79
NUP98-220ENST00000533346 SSU72P8A0A1W2PR75 194 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 GJB6O95452 261 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 SKILP12757 684 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 HLA-EP13747 358 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 DESP17661 470 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 CASP14P31944 242 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 ETFBP38117 255 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 RPS14P62263 151 aaKnown RBP10.1□□□□□ -0.79
NUP98-220ENST00000533346 OGDHQ02218 1023 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 ZNF33AQ06730 810 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 MAPK8IP2Q13387 824 aaPredicted RBP10.1□□□□□ -0.79
NUP98-220ENST00000533346 ELAVL3Q14576 367 aaKnown RBP10.1□□□□□ -0.79
NUP98-220ENST00000533346 LPAL2Q16609 132 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 ASTE1Q2TB18 679 aaPredicted RBP10.1□□□□□ -0.79
NUP98-220ENST00000533346 RAB6CQ53S08 254 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 DCUN1D2Q6PH85 259 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 SLC23A3Q6PIS1 610 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 RABEPKQ7Z6M1 372 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 VPS36Q86VN1 386 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 SYT12Q8IV01 421 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 VSTM4Q8IW00 320 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 KIAA2013Q8IYS2 634 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 SH2D3CQ8N5H7 860 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 CEP76Q8TAP6 659 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 MCEEQ96PE7 176 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 FAM129BQ96TA1 746 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 C2orf49Q9BVC5 232 aaPredicted RBP10.1□□□□□ -0.79
NUP98-220ENST00000533346 RAB6CQ9H0N0 254 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 SGK2Q9HBY8 427 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 OSGEPQ9NPF4 335 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 TMPRSS4Q9NRS4 437 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 DONSONQ9NYP3 566 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 ARHGAP20Q9P2F6 1191 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 SLCO3A1Q9UIG8 710 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 FZD4Q9ULV1 537 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 TPX2Q9ULW0 747 aaKnown RBP10.1□□□□□ -0.79
NUP98-220ENST00000533346 FZD10Q9ULW2 581 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 PCDH15Q96QU1 1955 aa10.1□□□□□ -0.79
NUP98-220ENST00000533346 A0A087X0T9 212 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 TM4SF5O14894 197 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 MCF2LO15068 1137 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 MAP3K13O43283 966 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 SIN3BO75182 1162 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 ZMPSTE24O75844 475 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 LRIG2O94898 1065 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 RHOCP08134 193 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 PLEKP08567 350 aaPredicted RBP10.09□□□□□ -0.79
NUP98-220ENST00000533346 FAM228BP0C875 321 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 ACADMP11310 421 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 OR1E1P30953 314 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 PCK1P35558 622 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 CTSOP43234 321 aaPredicted RBP10.09□□□□□ -0.79
NUP98-220ENST00000533346 HCAR3P49019 387 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 YBEYP58557 167 aaPredicted RBP10.09□□□□□ -0.79
NUP98-220ENST00000533346 ZNF252P-AS1Q0IIN9 211 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 PUM1Q14671 1186 aaKnown RBP eCLIP10.09□□□□□ -0.79
NUP98-220ENST00000533346 CDO1Q16878 200 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 RNF219Q5W0B1 726 aaPredicted RBP10.09□□□□□ -0.79
NUP98-220ENST00000533346 LYSMD4Q5XG99 296 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 ZNF776Q68DI1 518 aaPredicted RBP10.09□□□□□ -0.79
NUP98-220ENST00000533346 TMC6Q7Z403 805 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 PHLDB2Q86SQ0 1253 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 CIR1Q86X95 450 aaPredicted RBP10.09□□□□□ -0.79
NUP98-220ENST00000533346 SLC41A1Q8IVJ1 513 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 ARFGAP1Q8N6T3 406 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 CCDC185Q8N715 623 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 NIPA2Q8N8Q9 360 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 OR8K1Q8NGG5 319 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 NETO1Q8TDF5 533 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 ISG20Q96AZ6 181 aaKnown RBP10.09□□□□□ -0.79
NUP98-220ENST00000533346 RMDN1Q96DB5 314 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 HINFPQ9BQA5 517 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 RTKNQ9BST9 563 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 CEP44Q9C0F1 390 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 SLC6A17Q9H1V8 727 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 MAGEH1Q9H213 219 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 KDM4CQ9H3R0 1056 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 MPP6Q9NZW5 540 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 CNOT8Q9UFF9 292 aaKnown RBP10.09□□□□□ -0.79
NUP98-220ENST00000533346 SLC25A13Q9UJS0 675 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 INVSQ9Y283 1065 aa10.09□□□□□ -0.79
NUP98-220ENST00000533346 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.08□□□□□ -0.8
NUP98-220ENST00000533346 A0A0D9SEW6 157 aa10.08□□□□□ -0.8
NUP98-220ENST00000533346 TTC34A8MYJ7 566 aa10.08□□□□□ -0.8
NUP98-220ENST00000533346 FAM72CH0Y354 149 aa10.08□□□□□ -0.8
NUP98-220ENST00000533346 SLC30A4O14863 429 aa10.08□□□□□ -0.8
NUP98-220ENST00000533346 SLC7A4O43246 635 aa10.08□□□□□ -0.8
NUP98-220ENST00000533346 RNASEH1O60930 286 aaKnown RBP10.08□□□□□ -0.8
NUP98-220ENST00000533346 SRGAP2O75044 1071 aa10.08□□□□□ -0.8
NUP98-220ENST00000533346 CD160O95971 181 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms