RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TBC1D31Q96DN5 1066 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 ARHGEF26Q96DR7 871 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 RPL10LQ96L21 214 aaKnown RBP20.99■□□□□ 0.95
CCS-208ENST00000533244 PEBP4Q96S96 227 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 CHP1Q99653 195 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 MTG2Q9H4K7 406 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 CD93Q9NPY3 652 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 TMEM248Q9NWD8 314 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 VPS28Q9UK41 221 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 NYNRINQ9P2P1 1898 aaKnown RBP20.98■□□□□ 0.95
CCS-208ENST00000533244 A0A0D9SEW6 157 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 TTC34A8MYJ7 566 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 LRCH4O75427 683 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 RHOBTB1O94844 696 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 IGLV3-19P01714 112 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 TGM1P22735 817 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 MAPKAPK2P49137 400 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 NUMBP49757 651 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 ACAP1Q15027 740 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 ELF2Q15723 593 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 TSR1Q2NL82 804 aaKnown RBP20.98■□□□□ 0.95
CCS-208ENST00000533244 KIAA1324Q6UXG2 1013 aaKnown RBP20.98■□□□□ 0.95
CCS-208ENST00000533244 TC2NQ8N9U0 490 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 FRS2Q8WU20 508 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 SIPA1Q96FS4 1042 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 MUC3BQ9H195 1237 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 ITM2CQ9NQX7 267 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 NDFIP2Q9NV92 336 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 SDK1Q7Z5N4 2213 aa20.98■□□□□ 0.95
CCS-208ENST00000533244 TARSL2A2RTX5 802 aaKnown RBP20.97■□□□□ 0.95
CCS-208ENST00000533244 LRP3O75074 770 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 RNF8O76064 485 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 MIPP30301 263 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 C9orf64Q5T6V5 341 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 NIPA2Q8N8Q9 360 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 PRCCQ92733 491 aaPredicted RBP20.97■□□□□ 0.95
CCS-208ENST00000533244 NCAPGQ9BPX3 1015 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 C2orf49Q9BVC5 232 aaPredicted RBP20.97■□□□□ 0.95
CCS-208ENST00000533244 RSPH9Q9H1X1 276 aaPredicted RBP20.97■□□□□ 0.95
CCS-208ENST00000533244 VPS51Q9UID3 782 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 HS3ST2Q9Y278 367 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 THADAQ6YHU6 1953 aa20.97■□□□□ 0.95
CCS-208ENST00000533244 EDDM13A0A1B0GTR0 161 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 EIF3CLB5ME19 914 aaKnown RBP20.96■□□□□ 0.95
CCS-208ENST00000533244 ATP9BO43861 1147 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 SIN3BO75182 1162 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 HTR7P34969 479 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 PCK1P35558 622 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 KRT83P78385 493 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 SPDYCQ5MJ68 293 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 RWDD4Q6NW29 188 aaKnown RBP20.96■□□□□ 0.95
CCS-208ENST00000533244 SLC36A4Q6YBV0 504 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 PSTKQ8IV42 348 aaKnown RBP20.96■□□□□ 0.95
CCS-208ENST00000533244 OR7D4Q8NG98 312 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 PTPRN2Q92932 1015 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 EIF3CQ99613 913 aaKnown RBP20.96■□□□□ 0.95
CCS-208ENST00000533244 SNRNP25Q9BV90 132 aaKnown RBP20.96■□□□□ 0.95
CCS-208ENST00000533244 NUP85Q9BW27 656 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 DEF6Q9H4E7 631 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 NHEJ1Q9H9Q4 299 aaPredicted RBP20.96■□□□□ 0.95
CCS-208ENST00000533244 SLC25A13Q9UJS0 675 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 CYP8B1Q9UNU6 501 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 AP4E1Q9UPM8 1137 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 PCDHGA5Q9Y5G8 931 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 TNRC6BQ9UPQ9 1833 aaKnown RBP20.96■□□□□ 0.95
CCS-208ENST00000533244 CFAP54Q96N23 3096 aa20.96■□□□□ 0.95
CCS-208ENST00000533244 WASH4PA8MWX3 477 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 SNAP91O60641 907 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 ZMPSTE24O75844 475 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 NNMTP40261 264 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 RPS14P62263 151 aaKnown RBP20.95■□□□□ 0.95
CCS-208ENST00000533244 GNA12Q03113 381 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 ZBTB16Q05516 673 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 ERMARDQ5T6L9 678 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 SH2D3CQ8N5H7 860 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 EPAS1Q99814 870 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 HINFPQ9BQA5 517 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 PACSIN1Q9BY11 444 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 ACE2Q9BYF1 805 aaPredicted RBP20.95■□□□□ 0.95
CCS-208ENST00000533244 PARD6AQ9NPB6 346 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 PCSK1NQ9UHG2 260 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 ANAPC7Q9UJX3 599 aa20.95■□□□□ 0.95
CCS-208ENST00000533244 CXorf51AA0A1B0GTR3 108 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 AKR1B10O60218 316 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 SRCP12931 536 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 EPHB2P29323 1055 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 TPMTP51580 245 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 PIGHQ14442 188 aaPredicted RBP20.95■□□□□ 0.94
CCS-208ENST00000533244 CA9Q16790 459 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 ZNF776Q68DI1 518 aaPredicted RBP20.95■□□□□ 0.94
CCS-208ENST00000533244 LPCAT2Q7L5N7 544 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 RTL3Q8N8U3 475 aaKnown RBP20.95■□□□□ 0.94
CCS-208ENST00000533244 CCDC42Q96M95 316 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 FAM129BQ96TA1 746 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 GPATCH2LQ9NWQ4 482 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 IP6K2Q9UHH9 426 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 USP18Q9UMW8 372 aa20.95■□□□□ 0.94
CCS-208ENST00000533244 PRPSAP2O60256 369 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 MT-CO1P00395 513 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 H2AFZP0C0S5 128 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms