RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FTCDO95954 541 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 DLDP09622 509 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 NNMTP40261 264 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 CETN2P41208 172 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 KIR2DL1P43626 348 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 RWDD2BP57060 319 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ST8SIA6P61647 398 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ECT2LQ008S8 904 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 DPYSQ14117 519 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 PARP15Q460N3 678 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 FUT11Q495W5 492 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 HSF5Q4G112 596 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 TMCO3Q6UWJ1 677 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 TRMT11Q7Z4G4 463 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZNF354CQ86Y25 554 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 CHPFQ8IZ52 775 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 UMODL1-AS1Q8N2C9 162 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZNF513Q8N8E2 541 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 EXD1Q8NHP7 514 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 RPLP0P6Q8NHW5 317 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 USP33Q8TEY7 942 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 KRT35Q92764 455 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ARHGEF2Q92974 986 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ACDQ96AP0 544 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ALG14Q96F25 216 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 RBM41Q96IZ5 413 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 RNF157Q96PX1 679 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 IER2Q9BTL4 223 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 C2orf49Q9BVC5 232 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 PRDM16Q9HAZ2 1276 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ATP13A1Q9HD20 1204 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 PYCARDQ9ULZ3 195 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 OR51B4Q9Y5P0 310 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ARHGAP42A6NI28 874 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 C3orf70A6NLC5 250 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 CHURC1-FNTBB4DL54 471 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 RASA4BC9J798 803 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 DCLK1O15075 740 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 RASA4O43374 803 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 KIF5CO60282 957 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 SRPRAP08240 638 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 HNRNPLP14866 589 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZFXP17010 805 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 AVPR2P30518 371 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 SERPINB6P35237 376 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 PEX5P50542 639 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 COPS2P61201 443 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 SLC20A2Q08357 652 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 RPS6KA1Q15418 735 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 EOGTQ5NDL2 527 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 EGFLAMQ63HQ2 1017 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 RETSATQ6NUM9 610 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 MFSD7Q6UXD7 560 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 CCDC50Q8IVM0 306 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 CCDC33Q8N5R6 958 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 ALLCQ8N6M5 410 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 TXNDC5Q8NBS9 432 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 OR7D4Q8NG98 312 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 PCDH19Q8TAB3 1148 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 CYB5D2Q8WUJ1 264 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 FAF2Q96CS3 445 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 ACE2Q9BYF1 805 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 SLC39A8Q9C0K1 460 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 CHRDQ9H2X0 955 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 C11orf16Q9NQ32 467 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 THAP10Q9P2Z0 257 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 SLC25A13Q9UJS0 675 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 ERVW-1Q9UQF0 538 aa11.51□□□□□ -0.57
TRAPPC4-211ENST00000533012 COL4A2P08572 1712 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 ANTXRLA6NF34 631 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 CBX4O00257 560 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 KDELR3O43731 214 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 KLF8O95600 359 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 NTSR1P30989 418 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 ACVRL1P37023 503 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 CDKN2BP42772 138 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 CTSOP43234 321 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 MARCKSL1P49006 195 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 NUMBP49757 651 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 TERF1P54274 439 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 TFDP2Q14188 446 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZNF234Q14588 700 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 PAFAH1B3Q15102 231 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 PTPRNQ16849 979 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 FNDC3BQ53EP0 1204 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 TFDP3Q5H9I0 405 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZNF569Q5MCW4 686 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 MEI1Q5TIA1 1274 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 SERPINA13PQ6UXR4 307 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 SPOCD1Q6ZMY3 1216 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 MAMSTRQ6ZN01 415 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 Q6ZS52 159 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 RFX6Q8HWS3 928 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 SPEM1Q8N4L4 309 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 TMEM105Q8N8V8 129 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 DCAF4L2Q8NA75 395 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 IL17RCQ8NAC3 791 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms