RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 BTBD1Q9H0C5 482 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 WDCPQ9H6R7 721 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 FBRSQ9HAH7 460 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 TM9SF3Q9HD45 589 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 SUSD2Q9UGT4 822 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 TBC1D30Q9Y2I9 924 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 KMT2BQ9UMN6 2715 aaPredicted RBP18.31■□□□□ 0.52
SMG1-203ENST00000532700 MAP1BP46821 2468 aaKnown RBP18.3■□□□□ 0.52
SMG1-203ENST00000532700 CHD5Q8TDI0 1954 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 AKAP13Q12802 2813 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 TARSL2A2RTX5 802 aaKnown RBP18.3■□□□□ 0.52
SMG1-203ENST00000532700 FAM47DPA6NHR8 397 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 PCNX2A6NKB5 2137 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 KCNK3O14649 394 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 TEX33O43247 280 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 SH3BP5O60239 455 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 RNASEH2AO75792 299 aaKnown RBP18.3■□□□□ 0.52
SMG1-203ENST00000532700 MOCS3O95396 460 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 UNGP13051 313 aaPredicted RBP18.3■□□□□ 0.52
SMG1-203ENST00000532700 SLC8A1P32418 973 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 ATXN3P54252 364 aaPredicted RBP18.3■□□□□ 0.52
SMG1-203ENST00000532700 PPP2CBP62714 309 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 PPP2CAP67775 309 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 SHC2P98077 582 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 BRMS1LQ5PSV4 323 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 NCEH1Q6PIU2 408 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 Q6ZVU0 165 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 RABEPKQ7Z6M1 372 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 CCDC117Q8IWD4 279 aaPredicted RBP18.3■□□□□ 0.52
SMG1-203ENST00000532700 ANGPTL2Q9UKU9 493 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 STAP1Q9ULZ2 295 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 NEU3Q9UQ49 428 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 ACTL7AQ9Y615 435 aa18.3■□□□□ 0.52
SMG1-203ENST00000532700 IGLV3-10A0A075B6K4 115 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.29■□□□□ 0.52
SMG1-203ENST00000532700 LRRC10BA6NIK2 292 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 DRGXA6NNA5 263 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 UPK3BL1B0FP48 263 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 UPK3BL2E5RIL1 263 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 E9PAM4 449 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 FAM72CH0Y354 149 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 SMAD6O43541 496 aaKnown RBP18.29■□□□□ 0.52
SMG1-203ENST00000532700 WNT1P04628 370 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 CTSLP07711 333 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 SYPP08247 313 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 GNSP15586 552 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 CDH4P55283 916 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 UBXN1Q04323 297 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 ZNF177Q13360 481 aaPredicted RBP18.29■□□□□ 0.52
SMG1-203ENST00000532700 SLC12A1Q13621 1099 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 CDO1Q16878 200 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 KIF19Q2TAC6 998 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 CCDC14Q49A88 953 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 TTC31Q49AM3 519 aaPredicted RBP18.29■□□□□ 0.52
SMG1-203ENST00000532700 ANO6Q4KMQ2 910 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 FKBP15Q5T1M5 1219 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 FAM72AQ5TYM5 149 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 KIAA0895LQ68EN5 471 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 FAM72DQ6L9T8 149 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 LINGO4Q6UY18 593 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 USP30Q70CQ3 517 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 FAM72BQ86X60 149 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 OR7D4Q8NG98 312 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 GANCQ8TET4 914 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 RXFP2Q8WXD0 754 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 SLC6A18Q96N87 628 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 ERGIC2Q96RQ1 377 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 PCED1AQ9H1Q7 454 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 NDFIP2Q9NV92 336 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 RRN3Q9NYV6 651 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 ADAMTS1Q9UHI8 967 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 VPS51Q9UID3 782 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 VPS28Q9UK41 221 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 SNX11Q9Y5W9 270 aa18.29■□□□□ 0.52
SMG1-203ENST00000532700 ACACBO00763 2458 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 ATP9BO43861 1147 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 RTN2O75298 545 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 CLDN11O75508 207 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 ENDOD1O94919 500 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 TPM2P07951 284 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 SRCP12931 536 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 RRM1P23921 792 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 ADPRHP54922 357 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 SNX16P57768 344 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 DLG2Q15700 870 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 CLEC16AQ2KHT3 1053 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 HLA-BQ31612 363 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 ZNF677Q86XU0 584 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 DNAAF5Q86Y56 855 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 HDDC3Q8N4P3 179 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 SH2D3CQ8N5H7 860 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 CCDC185Q8N715 623 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 ANKRD20A12PQ8NF67 263 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 SPAG5Q96R06 1193 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 TMEM121BQ9BXQ6 578 aaPredicted RBP18.28■□□□□ 0.52
SMG1-203ENST00000532700 GAREM1Q9H706 876 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 SGK2Q9HBY8 427 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 BTBD3Q9Y2F9 522 aa18.28■□□□□ 0.52
SMG1-203ENST00000532700 TCRBV5S1A1TA0A578 114 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 SYCE3A1L190 88 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms