RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZCWPW1Q9H0M4 648 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 CTNNAL1Q9UBT7 734 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 ACOT9Q9Y305 439 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 C10orf71Q711Q0 1435 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 PEAK1Q9H792 1746 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 KCNK1O00180 336 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 AGRPO00253 132 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 OPLAHO14841 1288 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 STAU1O95793 577 aaKnown RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 ECHDC2Q86YB7 292 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 BBS7Q8IWZ6 715 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 MAGEB18Q96M61 343 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 SHCBP1LQ9BZQ2 653 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 A0A1W2PQH9 124 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 SIGLEC16A6NMB1 481 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 RNF103O00237 685 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 HPGDP15428 266 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 SERPINB10P48595 397 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 CNTN1Q12860 1018 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 ILF2Q12905 390 aaKnown RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 ZACNQ401N2 412 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 LRRC23Q53EV4 343 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 VARS2Q5ST30 1063 aaKnown RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 TMC5Q6UXY8 1006 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 GPAMQ9HCL2 828 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 LRP6O75581 1613 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 TPH1P17752 444 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 PRIM2P49643 509 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 MGAT5Q09328 741 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 TRIP10Q15642 601 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 C12orf29Q8N999 325 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 FBXO25Q8TCJ0 367 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 ZBTB10Q96DT7 871 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 FUCA2Q9BTY2 467 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 ZNHIT2Q9UHR6 403 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 CACNB4O00305 520 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 NPY2RP49146 381 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 ICE2Q659A1 982 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 SUGP1Q8IWZ8 645 aaKnown RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 THUMPD3Q9BV44 507 aaKnown RBP11.5□□□□□ -0.57
PTPRK-221ENST00000532331 YIPF3Q9GZM5 350 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 RMND5AQ9H871 391 aa11.5□□□□□ -0.57
PTPRK-221ENST00000532331 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 F8W810 466 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 DAB1O75553 588 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 MLNP12872 115 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 GLRBP48167 497 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 OVGP1Q12889 678 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 CDC16Q13042 620 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 C15orf59Q2T9L4 293 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 KCNT2Q6UVM3 1135 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 PRSS55Q6UWB4 352 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 LRRC34Q8IZ02 419 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 C2orf15Q8WU43 125 aaKnown RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 GPR88Q9GZN0 384 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 GMIPQ9P107 970 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 COL1A1P02452 1464 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 C22orf31O95567 290 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 KELP23276 732 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 NUDT2P50583 147 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 ZNF792Q3KQV3 632 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 DAB2IPQ5VWQ8 1189 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 MYCBPAPQ8TBZ2 947 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 GLMNQ92990 594 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 MYOCQ99972 504 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 POLMQ9NP87 494 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 SHOC2Q9UQ13 582 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 PER2O15055 1255 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 THRAP10827 490 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 PFKPQ01813 784 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 TCEA2Q15560 299 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 SRLQ86TD4 932 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 CASP10Q92851 521 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 MFSD14AQ96MC6 490 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 TMBIM4Q9HC24 238 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 CLUHO75153 1309 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 SLCO1B7G3V0H7 640 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 NDUFB5O43674 189 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 RPL17P18621 184 aaKnown RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 CCND1P24385 295 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 WASP42768 502 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 CPA2P48052 419 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 ZNF143P52747 638 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-221ENST00000532331 GJA9P57773 515 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 TJAP1Q5JTD0 557 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 BRMS1LQ5PSV4 323 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 LRRC49Q8IUZ0 686 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 GLIS3Q8NEA6 775 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 SHDQ96IW2 340 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 AHSPQ9NZD4 102 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 PTPRJQ12913 1337 aa11.49□□□□□ -0.57
PTPRK-221ENST00000532331 CORO1AP31146 461 aaKnown RBP11.48□□□□□ -0.57
PTPRK-221ENST00000532331 PURAQ00577 322 aaKnown RBP11.48□□□□□ -0.57
PTPRK-221ENST00000532331 ST3GAL1Q11201 340 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 HYIQ5T013 277 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 ZNF655Q8N720 491 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-221ENST00000532331 SNX27Q96L92 541 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms