RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 KRT83P78385 493 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 SYCP2LQ5T4T6 812 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 ARTNQ5T4W7 220 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 C6orf118Q5T5N4 469 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 PEAR1Q5VY43 1037 aaPredicted RBP23.6■■□□□ 1.37
CAPN1-222ENST00000532285 TCEAL6Q6IPX3 200 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 CADM4Q8NFZ8 388 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 TCEAL3Q969E4 200 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 GPR174Q9BXC1 333 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 ZYG11BQ9C0D3 744 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 TSPY26PQ9H489 355 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 PARVAQ9NVD7 372 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 EVLQ9UI08 416 aaPredicted RBP23.6■■□□□ 1.37
CAPN1-222ENST00000532285 SCML1Q9UN30 329 aa23.6■■□□□ 1.37
CAPN1-222ENST00000532285 BZW2Q9Y6E2 419 aaKnown RBP23.6■■□□□ 1.37
CAPN1-222ENST00000532285 DNAH14Q0VDD8 3507 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 SLC30A4O14863 429 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 FTLP02792 175 aaPredicted RBP23.59■■□□□ 1.37
CAPN1-222ENST00000532285 DESP17661 470 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 ZBED6P86452 979 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 TTC31Q49AM3 519 aaPredicted RBP23.59■■□□□ 1.37
CAPN1-222ENST00000532285 LRSAM1Q6UWE0 723 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 RABEPKQ7Z6M1 372 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 TFAP2DQ7Z6R9 452 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 CEP76Q8TAP6 659 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 PTPRN2Q92932 1015 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 NTAN1Q96AB6 310 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 CNPY3Q9BT09 278 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 C2orf49Q9BVC5 232 aaPredicted RBP23.59■■□□□ 1.37
CAPN1-222ENST00000532285 RETREG1Q9H6L5 497 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 RXFP3Q9NSD7 469 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 CAPN11Q9UMQ6 739 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 NUMA1Q14980 2115 aa23.59■■□□□ 1.37
CAPN1-222ENST00000532285 CHD5Q8TDI0 1954 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 PATE3B3GLJ2 98 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 DDX3XO00571 662 aaKnown RBP eCLIP23.58■■□□□ 1.373e-11■■■■■ 33.2
CAPN1-222ENST00000532285 CCP110O43303 1012 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 RTN2O75298 545 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 SFSWAPQ12872 951 aaKnown RBP23.58■■□□□ 1.37
CAPN1-222ENST00000532285 TRIM61Q5EBN2 209 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 WDR45BQ5MNZ6 344 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 PLEKHA7Q6IQ23 1121 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 ZNF783Q6ZMS7 281 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 ERMP1Q7Z2K6 904 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 FAM124AQ86V42 546 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 CCDC185Q8N715 623 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 CPLX3Q8WVH0 158 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 NUSAP1Q9BXS6 441 aaKnown RBP23.58■■□□□ 1.37
CAPN1-222ENST00000532285 PCED1AQ9H1Q7 454 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 ADAMTS9Q9P2N4 1935 aa23.58■■□□□ 1.37
CAPN1-222ENST00000532285 ATXN2Q99700 1313 aaKnown RBP23.58■■□□□ 1.36
CAPN1-222ENST00000532285 LNP1A1A4G5 178 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 ILVBLA1L0T0 632 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 ATP9BO43861 1147 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 PLEKP08567 350 aaPredicted RBP23.57■■□□□ 1.36
CAPN1-222ENST00000532285 IRX4P78413 519 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 SCAPQ12770 1279 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 MAMLD1Q13495 774 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 DUOXA1Q1HG43 343 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 MANEALQ5VSG8 457 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 SLC23A3Q6PIS1 610 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 USP30Q70CQ3 517 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 DGLUCYQ7Z3D6 616 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 SLFN11Q7Z7L1 901 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 RGL4Q8IZJ4 473 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 FRS2Q8WU20 508 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 FAM129BQ96TA1 746 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 EDEM2Q9BV94 578 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 XPO4Q9C0E2 1151 aaKnown RBP23.57■■□□□ 1.36
CAPN1-222ENST00000532285 PABPC3Q9H361 631 aaKnown RBP23.57■■□□□ 1.36
CAPN1-222ENST00000532285 ZNF212Q9UDV6 495 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 NCKAP1Q9Y2A7 1128 aa23.57■■□□□ 1.36
CAPN1-222ENST00000532285 LUC7L2Q9Y383 392 aaKnown RBP23.57■■□□□ 1.36
CAPN1-222ENST00000532285 AIF1P55008 147 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 ELAVL3Q14576 367 aaKnown RBP23.56■■□□□ 1.36
CAPN1-222ENST00000532285 CST6Q15828 149 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 ACCSLQ4AC99 568 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 TDRD12Q587J7 1177 aaKnown RBP23.56■■□□□ 1.36
CAPN1-222ENST00000532285 STPG1Q5TH74 334 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 HGSNATQ68CP4 663 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 SCYL2Q6P3W7 929 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 VPS36Q86VN1 386 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 MMAAQ8IVH4 418 aaKnown RBP23.56■■□□□ 1.36
CAPN1-222ENST00000532285 STK40Q8N2I9 435 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 SH2D3CQ8N5H7 860 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 DCAF4L2Q8NA75 395 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 TRIM11Q96F44 468 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 PSMB7Q99436 277 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 BTBD1Q9H0C5 482 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 HS3ST2Q9Y278 367 aa23.56■■□□□ 1.36
CAPN1-222ENST00000532285 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.56■■□□□ 1.36
CAPN1-222ENST00000532285 A0A0D9SEW6 157 aa23.55■■□□□ 1.36
CAPN1-222ENST00000532285 METTL12A8MUP2 240 aa23.55■■□□□ 1.36
CAPN1-222ENST00000532285 MEI4A8MW99 385 aa23.55■■□□□ 1.36
CAPN1-222ENST00000532285 CBFA2T2O43439 604 aa23.55■■□□□ 1.36
CAPN1-222ENST00000532285 SERPING1P05155 500 aa23.55■■□□□ 1.36
CAPN1-222ENST00000532285 ACSL1P33121 698 aa23.55■■□□□ 1.36
CAPN1-222ENST00000532285 NFKBIBQ15653 356 aa23.55■■□□□ 1.36
CAPN1-222ENST00000532285 DLG2Q15700 870 aa23.55■■□□□ 1.36
CAPN1-222ENST00000532285 EFHC2Q5JST6 749 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms