RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ADPRHP54922 357 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 C21orf59P57076 290 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 KCNMA1Q12791 1236 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 ZNF177Q13360 481 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-205ENST00000531042 HSP90AA4PQ58FG1 418 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 C14orf80Q86SX3 495 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 TMEM35BQ8NCS4 154 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 OR14C36Q8NHC7 312 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 SPAG5Q96R06 1193 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 NPY6RQ99463 290 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 SIK2Q9H0K1 926 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 PIGVQ9NUD9 493 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 RRN3Q9NYV6 651 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 SLC25A13Q9UJS0 675 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 OR51B4Q9Y5P0 310 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 CABIN1Q9Y6J0 2220 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 DSPP15924 2871 aaKnown RBP16.24■□□□□ 0.19
CPSF1-205ENST00000531042 ATP9BO43861 1147 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 CLDN11O75508 207 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 ADCY5O95622 1261 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 WNT1P04628 370 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 CYP11B1P15538 503 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 TFE3P19532 575 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-205ENST00000531042 GRK6P43250 576 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 GABRB2P47870 512 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 CXCR3P49682 368 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 METAP1P53582 386 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 RAPGEF1Q13905 1077 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 DRAP1Q14919 205 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-205ENST00000531042 ACCSLQ4AC99 568 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 BRMS1LQ5PSV4 323 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 LRSAM1Q6UWE0 723 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-205ENST00000531042 CCNI2Q6ZMN8 369 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-205ENST00000531042 NT5C3BQ969T7 300 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 FAM131CQ96AQ9 280 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 SKA1Q96BD8 255 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 TKTL2Q9H0I9 626 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 PDCL3Q9H2J4 239 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 WDCPQ9H6R7 721 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 ANLNQ9NQW6 1124 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 ARHGEF38Q9NXL2 777 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.23■□□□□ 0.198e-11■■□□□ 13.1
CPSF1-205ENST00000531042 DACH1Q9UI36 760 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 RALYQ9UKM9 306 aaKnown RBP16.23■□□□□ 0.19
CPSF1-205ENST00000531042 SARDHQ9UL12 918 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 TPX2Q9ULW0 747 aaKnown RBP16.23■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D30Q9Y2I9 924 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 FHOD1Q9Y613 1164 aa16.23■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3DA0A087WVF3 549 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3IA0A087WXS9 549 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3EA0A087X179 549 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3KA0A087X1G2 549 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 A0A1B0GTQ1 180 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 A0A1W2PR77 199 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3FA6NER0 549 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3LB9A6J9 549 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 WNT9AO14904 365 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3HP0C7X1 549 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 CD38P28907 300 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 SULT1E1P49888 294 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 CDH4P55283 916 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 RNASE9P60153 205 aaKnown RBP16.22■□□□□ 0.19
CPSF1-205ENST00000531042 IL9RQ01113 521 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 SCAPQ12770 1279 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 DLG2Q15700 870 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 KLHDC7AQ5VTJ3 777 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3GQ6DHY5 549 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3CQ6IPX1 549 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 DSG4Q86SJ6 1040 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 TBC1D3Q8IZP1 549 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-205ENST00000531042 OR8D1Q8WZ84 308 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 C18orf8Q96DM3 657 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 PGAP3Q96FM1 320 aaPredicted RBP16.22■□□□□ 0.19
CPSF1-205ENST00000531042 NAA15Q9BXJ9 866 aaKnown RBP16.22■□□□□ 0.19
CPSF1-205ENST00000531042 KDM4CQ9H3R0 1056 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 AASDHPPTQ9NRN7 309 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 VPS28Q9UK41 221 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 STAP1Q9ULZ2 295 aa16.22■□□□□ 0.19
CPSF1-205ENST00000531042 I6L893 689 aaPredicted RBP16.21■□□□□ 0.19
CPSF1-205ENST00000531042 TAF4O00268 1085 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 PLK4O00444 970 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 MCF2LO15068 1137 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 ALOX15BO15296 676 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 TNFSF14O43557 240 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 LATO43561 262 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 CNTN5O94779 1100 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 F9P00740 461 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 SCNN1AP37088 669 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 PPP2CBP62714 309 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 PPP2CAP67775 309 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 PRAMEF14Q5SWL7 426 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 FAM46CQ5VWP2 391 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 TMPRSS7Q7RTY8 843 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 ERICH1Q86X53 443 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 XYLT1Q86Y38 959 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 ZNF683Q8IZ20 524 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 SH2D3CQ8N5H7 860 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 SERAC1Q96JX3 654 aa16.21■□□□□ 0.19
CPSF1-205ENST00000531042 ELF4Q99607 663 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms