RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PCDHAC2Q9Y5I4 1007 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 MAU2Q9Y6X3 613 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 MGAMO43451 1857 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 TEX51A0A1B0GUA7 166 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 OR5K3A6NET4 321 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TBX3O15119 743 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 PAPSS1O43252 624 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 DCXO43602 365 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 IL18RAPO95256 599 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 CDH1P12830 882 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 IMPDH1P20839 514 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 CNTFP26441 200 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 PIK3R1P27986 724 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 RRM2P31350 389 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 MFAP3P55082 362 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 GALK2Q01415 458 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 FCHO2Q0JRZ9 810 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 MERTKQ12866 999 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TRIM32Q13049 653 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ALCAMQ13740 583 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 RINT1Q6NUQ1 792 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 INTS5Q6P9B9 1019 aaKnown RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 USP51Q70EK9 711 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 GLRX5Q86SX6 157 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 CCDC28AQ8IWP9 274 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 C12orf56Q8IXR9 622 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 LRTOMTQ8WZ04 291 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 VPS33AQ96AX1 596 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 NGLY1Q96IV0 654 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SPATA17Q96L03 361 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 C8orf48Q96LL4 319 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 CSF3RQ99062 836 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ADI1Q9BV57 179 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TMEM117Q9H0C3 514 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 AS3MTQ9HBK9 375 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 PI4KBQ9UBF8 816 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 LOC100653049A0A140TA62 436 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 KRT34O76011 436 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 IL32P24001 234 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SERPINB9P50453 376 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ZNF135P52742 658 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 AP2S1P53680 142 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 KCNQ4P56696 695 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TNK2Q07912 1038 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 PEX6Q13608 980 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 STILQ15468 1287 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 PGS1Q32NB8 556 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TBC1D10BQ4KMP7 808 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 PERM1Q5SV97 790 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 LMBRD2Q68DH5 695 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 STXBP4Q6ZWJ1 553 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 CHSY3Q70JA7 882 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ZNF720Q7Z2F6 126 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 CAMK1DQ8IU85 385 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 RAVER1Q8IY67 606 aaKnown RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ELMOD2Q8IZ81 293 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ADGRF2Q8IZF7 708 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 CNTD1Q8N815 330 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TGFBRAP1Q8WUH2 860 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SEPT8Q92599 483 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 NRBF2Q96F24 287 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 VCPIP1Q96JH7 1222 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 GLT1D1Q96MS3 346 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SARDHQ9UL12 918 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SLC27A5Q9Y2P5 690 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 RAD54BQ9Y620 910 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 hCG_1818297A0A087WSY0 165 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 NOP56O00567 594 aaKnown RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TMCC2O75069 709 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TMEM63AO94886 807 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TBXAS1P24557 533 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ELK3P41970 407 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 DPP6P42658 865 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ARCN1P48444 511 aaKnown RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 MPP1Q00013 466 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ILF2Q12905 390 aaKnown RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SLC12A1Q13621 1099 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 TRIM25Q14258 630 aaKnown RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 MTX3Q5HYI7 312 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 RNF19BQ6ZMZ0 732 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ZBTB49Q6ZSB9 765 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 MON1BQ7L1V2 547 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 LURAP1LQ8IV03 231 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 IGDCC3Q8IVU1 814 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 CLYBLQ8N0X4 340 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 GABPB2Q8TAK5 448 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SNX19Q92543 992 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ATP6V1E2Q96A05 226 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SYTL2Q9HCH5 934 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 ANKHQ9HCJ1 492 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 SNTG2Q9NY99 539 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 PCDHGC3Q9UN70 934 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 WBP11Q9Y2W2 641 aaKnown RBP8.28□□□□□ -1.08
CSDE1-214ENST00000530886 GPSM3Q9Y4H4 160 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 LRRC37AA6NMS7 1700 aa8.28□□□□□ -1.08
CSDE1-214ENST00000530886 KBTBD13C9JR72 458 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 AP3B1O00203 1094 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 SOCS2O14508 198 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 MEIS2O14770 477 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms