RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 IGSF21Q96ID5 467 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 NDC1Q9BTX1 674 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 MRPL9Q9BYD2 267 aaKnown RBP7.52□□□□□ -1.21
SVIP-204ENST00000530199 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.52□□□□□ -1.21
SVIP-204ENST00000530199 IL17RBQ9NRM6 502 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 SACM1LQ9NTJ5 587 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 ZDHHC7Q9NXF8 308 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 CDH7Q9ULB5 785 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.52□□□□□ -1.21
SVIP-204ENST00000530199 F5P12259 2224 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 RELNP78509 3460 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 ABCB11O95342 1321 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 PCNX2A6NKB5 2137 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 LNP1A1A4G5 178 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 RRN3P2A6NIE6 340 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 CDX4O14627 284 aaPredicted RBP7.51□□□□□ -1.21
SVIP-204ENST00000530199 KIAA0391O15091 583 aaKnown RBP7.51□□□□□ -1.21
SVIP-204ENST00000530199 HOXA3O43365 443 aaPredicted RBP7.51□□□□□ -1.21
SVIP-204ENST00000530199 RPS6KA5O75582 802 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 RFPL2O75678 378 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 TYRP1P17643 537 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 SLC6A4P31645 630 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 KCNJ5P48544 419 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 NOMO3P69849 1222 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 VMACQ2NL98 169 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 USH1GQ495M9 461 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 C3orf38Q5JPI3 329 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 TCEAL6Q6IPX3 200 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 ZNF529Q6P280 563 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 ZNF783Q6ZMS7 281 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 STOX1Q6ZVD7 989 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 DEFB124Q8NES8 71 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 OR10H5Q8NGA6 315 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 TCEAL3Q969E4 200 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 HERPUD2Q9BSE4 406 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 PACSIN1Q9BY11 444 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 NT5C3AQ9H0P0 336 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 PLEKHA4Q9H4M7 779 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 SLC32A1Q9H598 525 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 BRD9Q9H8M2 597 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 LMAN1LQ9HAT1 526 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 SMURF2Q9HAU4 748 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 TMEM9BQ9NQ34 198 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 HEBP1Q9NRV9 189 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.51□□□□□ -1.21
SVIP-204ENST00000530199 MAP3K20Q9NYL2 800 aaKnown RBP7.51□□□□□ -1.21
SVIP-204ENST00000530199 CFAP97Q9P2B7 532 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 CDC23Q9UJX2 597 aa7.51□□□□□ -1.21
SVIP-204ENST00000530199 URB1O60287 2271 aaKnown RBP7.5□□□□□ -1.21
SVIP-204ENST00000530199 ABCA12Q86UK0 2595 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 SMIM35A0A1B0GVV1 85 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 B5MCH6 92 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 BTN3A1O00481 513 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 APOL1O14791 398 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 CAPN9O14815 690 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 B4GALT3O60512 393 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 STC2O76061 302 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 TSPAN15O95858 294 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 CHRNB1P11230 501 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 HALP42357 657 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 HSD17B4P51659 736 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 SLURP1P55000 103 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 RAC3P60763 192 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 PMS2P11Q13670 270 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 TRIM14Q14142 442 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 HABP2Q14520 560 aaPredicted RBP7.5□□□□□ -1.21
SVIP-204ENST00000530199 PGM5Q15124 567 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 CLLU1OSQ5K130 101 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 UTP14CQ5TAP6 766 aaKnown RBP7.5□□□□□ -1.21
SVIP-204ENST00000530199 KLHDC7AQ5VTJ3 777 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 ANKS6Q68DC2 871 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 KBTBD6Q86V97 674 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 TMEM151BQ8IW70 566 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 CHCHD4Q8N4Q1 142 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 ANKRD42Q8N9B4 389 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 BHLHE22Q8NFJ8 381 aaPredicted RBP7.5□□□□□ -1.21
SVIP-204ENST00000530199 NLGN4YQ8NFZ3 816 aaPredicted RBP7.5□□□□□ -1.21
SVIP-204ENST00000530199 MAML1Q92585 1016 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 VN1R3Q9BXE9 311 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 FAM49AQ9H0Q0 323 aaPredicted RBP7.5□□□□□ -1.21
SVIP-204ENST00000530199 RLIMQ9NVW2 624 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 ERAP1Q9NZ08 941 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 JKAMPQ9P055 326 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 ST3GAL5Q9UNP4 418 aa7.5□□□□□ -1.21
SVIP-204ENST00000530199 UBR5O95071 2799 aaPredicted RBP7.5□□□□□ -1.21
SVIP-204ENST00000530199 A0A1W2PPC4 97 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 A0A1W2PRX2 142 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 PIP5K1CO60331 668 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 ECI2O75521 394 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 RPP40O75818 363 aaKnown RBP7.49□□□□□ -1.21
SVIP-204ENST00000530199 CNOT4O95628 575 aaKnown RBP7.49□□□□□ -1.21
SVIP-204ENST00000530199 ABHD16AO95870 558 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 GLUD1P00367 558 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 SNHG28P0DPA3 235 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 PDHBP11177 359 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 MYCLP12524 364 aaPredicted RBP7.49□□□□□ -1.21
SVIP-204ENST00000530199 CLRN1P58418 232 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 RPS16P62249 146 aaKnown RBP7.49□□□□□ -1.21
SVIP-204ENST00000530199 CFHR1Q03591 330 aa7.49□□□□□ -1.21
SVIP-204ENST00000530199 SLC13A2Q13183 592 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms