RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 LRRK1Q38SD2 2015 aa8.44□□□□□ -1.06
GPATCH4-214ENST00000529520 ASXL3Q9C0F0 2248 aa8.44□□□□□ -1.06
GPATCH4-214ENST00000529520 SMG1Q96Q15 3661 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3DA0A087WVF3 549 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3IA0A087WXS9 549 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3EA0A087X179 549 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3KA0A087X1G2 549 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3FA6NER0 549 aaPredicted RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TRABD2BA6NFA1 517 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3LB9A6J9 549 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 K7ERQ8 282 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 M0QYT0 321 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 PCDHGA12O60330 932 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 SNAP91O60641 907 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 RNASEH1O60930 286 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 RTN2O75298 545 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 PAGE1O75459 146 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 MOCS3O95396 460 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 FGFR1OPO95684 399 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 CTSLP07711 333 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 GLI1P08151 1106 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3HP0C7X1 549 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 C5AR1P21730 350 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 CD38P28907 300 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 MAT2AP31153 395 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 CCR1P32246 355 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 CCT8P50990 548 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TAS2R38P59533 333 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 RNASE9P60153 205 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 CDK17Q00537 523 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 SLC6A3Q01959 620 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 DNAJC3Q13217 504 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 SUZ12Q15022 739 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 C5orf22Q49AR2 442 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 ACCSLQ4AC99 568 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 RAB6CQ53S08 254 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 EFHC1Q5JVL4 640 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 MIIPQ5JXC2 388 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3GQ6DHY5 549 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3CQ6IPX1 549 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TRNP1Q6NT89 227 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 DHRS13Q6UX07 377 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 C11orf57Q6ZUT1 292 aaPredicted RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 SND1Q7KZF4 910 aaKnown RBP eCLIP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 ADAT2Q7Z6V5 191 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 SPATS2Q86XZ4 545 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 CCDC117Q8IWD4 279 aaPredicted RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 ZNF683Q8IZ20 524 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 TBC1D3Q8IZP1 549 aaPredicted RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 OR2T34Q8NGX1 318 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 SAP25Q8TEE9 199 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 RNF34Q969K3 372 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 FAM131CQ96AQ9 280 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 RPRD1AQ96P16 312 aaPredicted RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 PSMB7Q99436 277 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 NPY6RQ99463 290 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 ELF4Q99607 663 aaPredicted RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 CDC6Q99741 560 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 ACE2Q9BYF1 805 aaPredicted RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 SIK2Q9H0K1 926 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 RAB6CQ9H0N0 254 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 CCDC86Q9H6F5 360 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 AASDHPPTQ9NRN7 309 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 PIGVQ9NUD9 493 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 ASNSD1Q9NWL6 643 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 FZD4Q9ULV1 537 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 LHX6Q9UPM6 363 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 GPSM3Q9Y4H4 160 aa8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 ANKRD11Q6UB99 2663 aaPredicted RBP8.43□□□□□ -1.06
GPATCH4-214ENST00000529520 A0A0D9SEW6 157 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 A0A1B0GVM2 712 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 TCAF2A6NFQ2 919 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 LRRC72A6NJI9 287 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 SMAD6O43541 496 aaKnown RBP8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 TNFSF14O43557 240 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 ATP9BO43861 1147 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 BNIP3LO60238 219 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 HSF2BPO75031 334 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 DAB1O75553 588 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 ADH1BP00325 375 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 ABCB4P21439 1286 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 GLDCP23378 1020 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 NOS2P35228 1153 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 GRK6P43250 576 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 MTIF2P46199 727 aaKnown RBP8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 CCR5P51681 352 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 C21orf59P57076 290 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 PTK2Q05397 1052 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 CYP4F3Q08477 520 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 CNTN1Q12860 1018 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 SLC12A1Q13621 1099 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 DLG2Q15700 870 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 COL28A1Q2UY09 1125 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 AGBL4Q5VU57 503 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 RNF219Q5W0B1 726 aaPredicted RBP8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 Q6ZVU0 165 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 KANSL1Q7Z3B3 1105 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 FAM71AQ8IYT1 594 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 SH2D3CQ8N5H7 860 aa8.42□□□□□ -1.06
GPATCH4-214ENST00000529520 EID2Q8N6I1 236 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms