RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 SBF2Q86WG5 1849 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 ASB14A6NK59 587 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 RXRGP48443 463 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 HSPA13P48723 471 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 PTP4A2Q12974 167 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 ZMAT2Q96NC0 199 aaKnown RBP18.23■□□□□ 0.51
LTBP3-210ENST00000528516 TBCCD1Q9NVR7 557 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 SORCS3Q9UPU3 1222 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 MYRFQ9Y2G1 1151 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 SDR42E2A6NKP2 422 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 MATN2O00339 956 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 SLC18A2Q05940 514 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 BNC2Q6ZN30 1099 aaPredicted RBP18.23■□□□□ 0.51
LTBP3-210ENST00000528516 RAB44Q7Z6P3 723 aaPredicted RBP18.23■□□□□ 0.51
LTBP3-210ENST00000528516 BBS5Q8N3I7 341 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 DNAJB3Q8WWF6 145 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 RSPH1Q8WYR4 309 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 C20orf27Q9GZN8 174 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 HACD3Q9P035 362 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 IPO11Q9UI26 975 aaKnown RBP18.23■□□□□ 0.51
LTBP3-210ENST00000528516 ITGA11Q9UKX5 1188 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 TBC1D30Q9Y2I9 924 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 THRAP10827 490 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 PCYT1AP49585 367 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 PDCD4Q53EL6 469 aaKnown RBP18.23■□□□□ 0.51
LTBP3-210ENST00000528516 TMEM110Q86TL2 294 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 PHTF2Q8N3S3 785 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 CXorf38Q8TB03 319 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 RNPEPQ9H4A4 650 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 ABI2Q9NYB9 513 aaPredicted RBP18.23■□□□□ 0.51
LTBP3-210ENST00000528516 RREB1Q92766 1687 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
LTBP3-210ENST00000528516 CCL15-CCL14A0A0B4J2E2 113 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 ZBTB11O95625 1053 aaPredicted RBP18.22■□□□□ 0.51
LTBP3-210ENST00000528516 RELAQ04206 551 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 CCL15Q16663 113 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 C6orf183Q5T699 404 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 TFAP2DQ7Z6R9 452 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 MYPNQ86TC9 1320 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 SNX32Q86XE0 403 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 DEFB106AQ8N104 65 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 TRPM4Q8TD43 1214 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 ZNF516Q92618 1163 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 SP110Q9HB58 689 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 HTR3EA5X5Y0 456 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 TSPAN8P19075 237 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 HSD17B4P51659 736 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 VGLL4Q14135 290 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 OGFRL1Q5TC84 451 aaPredicted RBP18.22■□□□□ 0.51
LTBP3-210ENST00000528516 MON1BQ7L1V2 547 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 SNX13Q9Y5W8 968 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 NCF1BA6NI72 391 aaPredicted RBP18.22■□□□□ 0.51
LTBP3-210ENST00000528516 NCF1CA8MVU1 366 aaPredicted RBP18.22■□□□□ 0.51
LTBP3-210ENST00000528516 CXorf49A8MYA2 514 aaPredicted RBP18.22■□□□□ 0.51
LTBP3-210ENST00000528516 KLF11O14901 512 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 DENRO43583 198 aaKnown RBP18.22■□□□□ 0.51
LTBP3-210ENST00000528516 NCF1P14598 390 aaPredicted RBP18.22■□□□□ 0.51
LTBP3-210ENST00000528516 CDH3P22223 829 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 TREML2Q5T2D2 321 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 FAM91A1Q658Y4 838 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
LTBP3-210ENST00000528516 TMEM192Q8IY95 271 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 MYO1HQ8N1T3 1032 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 NAT8LQ8N9F0 302 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 CCDC90BQ9GZT6 254 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 CDT1Q9H211 546 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 INIPQ9NRY2 104 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 FETUBQ9UGM5 382 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 CEPT1Q9Y6K0 416 aa18.22■□□□□ 0.51
LTBP3-210ENST00000528516 LAMB2P55268 1798 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 GRIN3BO60391 1043 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 IL18RAPO95256 599 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 SPRP35270 261 aaPredicted RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 PPARGP37231 505 aaPredicted RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 ATXN1P54253 815 aaKnown RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 XRRA1Q6P2D8 792 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 HOMEZQ8IX15 550 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 REPS2Q8NFH8 660 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 UPF3AQ9H1J1 476 aaKnown RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 UTP6Q9NYH9 597 aaKnown RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 WARS2Q9UGM6 360 aaKnown RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 CITO14578 2027 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 ADGRA2Q96PE1 1338 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 CLDN5O00501 218 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 RALBP11234 206 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 ADGRE1Q14246 886 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 HSF5Q4G112 596 aaPredicted RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 C6orf10Q5SRN2 563 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 OGFOD2Q6N063 350 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 XKR5Q6UX68 686 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 MZB1Q8WU39 189 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 IRGQQ8WZA9 623 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 NKD2Q969F2 451 aaPredicted RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 MBOAT7Q96N66 472 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 GPATCH1Q9BRR8 931 aaKnown RBP18.21■□□□□ 0.51
LTBP3-210ENST00000528516 ACKR2O00590 384 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 POMCP01189 267 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 CPB1P15086 417 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 CMC1Q7Z7K0 106 aa18.21■□□□□ 0.51
LTBP3-210ENST00000528516 CLEC4DQ8WXI8 215 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms