RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 ERCC4Q92889 916 aaPredicted RBP16.23■□□□□ 0.19
CTTN-212ENST00000527962 KAT5Q92993 513 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 MYEOVQ96EZ4 313 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 FAM81BQ96LP2 452 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 TIGD1Q96MW7 591 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 BBC3Q96PG8 261 aaPredicted RBP16.23■□□□□ 0.19
CTTN-212ENST00000527962 SLC4A5Q9BY07 1137 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 FAM204AQ9H8W3 233 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 GDPD2Q9HCC8 539 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 CYTH4Q9UIA0 394 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 CELSR3Q9NYQ7 3312 aa16.23■□□□□ 0.19
CTTN-212ENST00000527962 ASXL3Q9C0F0 2248 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.22■□□□□ 0.19
CTTN-212ENST00000527962 CBX4O00257 560 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 WNT9AO14904 365 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 ALOX15BO15296 676 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 PLRG1O43660 514 aaKnown RBP16.22■□□□□ 0.19
CTTN-212ENST00000527962 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
CTTN-212ENST00000527962 ACTN2P35609 894 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 STK19P49842 368 aaPredicted RBP16.22■□□□□ 0.19
CTTN-212ENST00000527962 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
CTTN-212ENST00000527962 BNIP3Q12983 259 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 ZNF177Q13360 481 aaPredicted RBP16.22■□□□□ 0.19
CTTN-212ENST00000527962 SFMBT2Q5VUG0 894 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 TMEM110Q86TL2 294 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 TRIM69Q86WT6 500 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 FGF11Q92914 225 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 KLHDC7BQ96G42 594 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 CCDC114Q96M63 670 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 RPRD1AQ96P16 312 aaPredicted RBP16.22■□□□□ 0.19
CTTN-212ENST00000527962 XPO7Q9UIA9 1087 aaKnown RBP16.22■□□□□ 0.19
CTTN-212ENST00000527962 CNTN6Q9UQ52 1028 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 CLCA2Q9UQC9 943 aa16.22■□□□□ 0.19
CTTN-212ENST00000527962 C10orf142B7Z368 130 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 MCF2LO15068 1137 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 RTN2O75298 545 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 GLI1P08151 1106 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 GLDCP23378 1020 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 MAT2AP31153 395 aaKnown RBP16.21■□□□□ 0.19
CTTN-212ENST00000527962 DRD3P35462 400 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 PPP2CBP62714 309 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 PPP2CAP67775 309 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 EFHC1Q5JVL4 640 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 NEK5Q6P3R8 708 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 FOXR2Q6PJQ5 311 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 ENOSF1Q7L5Y1 443 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 LMO3Q8TAP4 145 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 NOX5Q96PH1 765 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 PREBQ9HCU5 417 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 EVA1BQ9NVM1 165 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 ARHGAP20Q9P2F6 1191 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 VPS28Q9UK41 221 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTTN-212ENST00000527962 LOC400499M0QZD8 3231 aa16.21■□□□□ 0.19
CTTN-212ENST00000527962 COL5A1P20908 1838 aaPredicted RBP16.21■□□□□ 0.19
CTTN-212ENST00000527962 E5RJQ4 531 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 THAP12O43422 761 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 ATP9BO43861 1147 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 FGFR1OPO95684 399 aaKnown RBP16.2■□□□□ 0.18
CTTN-212ENST00000527962 IGLV3-25P01717 112 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 AFPP02771 609 aaKnown RBP16.2■□□□□ 0.18
CTTN-212ENST00000527962 ACP1P24666 158 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 GNA15P30679 374 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 DAB2P98082 770 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 KCNH2Q12809 1159 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 ZNF211Q13398 564 aaPredicted RBP16.2■□□□□ 0.18
CTTN-212ENST00000527962 DLG2Q15700 870 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 KLHL10Q6JEL2 608 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 DENND1BQ6P3S1 775 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 SPATS2Q86XZ4 545 aaKnown RBP16.2■□□□□ 0.18
CTTN-212ENST00000527962 ARHGEF19Q8IW93 802 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 SNIP1Q8TAD8 396 aaKnown RBP16.2■□□□□ 0.18
CTTN-212ENST00000527962 FRS2Q8WU20 508 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 ZNF606Q8WXB4 792 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 FAM131CQ96AQ9 280 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 INTS2Q9H0H0 1204 aaKnown RBP16.2■□□□□ 0.18
CTTN-212ENST00000527962 UBE2TQ9NPD8 197 aaPredicted RBP16.2■□□□□ 0.18
CTTN-212ENST00000527962 DYRK4Q9NR20 520 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 DDIT4Q9NX09 232 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 PPM1HQ9ULR3 514 aa16.2■□□□□ 0.18
CTTN-212ENST00000527962 CAPN8A6NHC0 703 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 ATXN7O15265 892 aaPredicted RBP16.19■□□□□ 0.18
CTTN-212ENST00000527962 HSF2BPO75031 334 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 CLDN11O75508 207 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 CALCAP01258 141 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 ALPPL2P10696 532 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 VAV1P15498 845 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 ITPKBP27987 946 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 KRT83P78385 493 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 CNTN1Q12860 1018 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 FBXL22Q6P050 247 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 ELOA2Q8IYF1 753 aaPredicted RBP16.19■□□□□ 0.18
CTTN-212ENST00000527962 NELFBQ8WX92 580 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 RFFLQ8WZ73 363 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 CRELD1Q96HD1 420 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 FCRL3Q96P31 734 aaPredicted RBP16.19■□□□□ 0.18
CTTN-212ENST00000527962 PRMT1Q99873 361 aaKnown RBP16.19■□□□□ 0.18
CTTN-212ENST00000527962 FEM1AQ9BSK4 669 aa16.19■□□□□ 0.18
CTTN-212ENST00000527962 PRORYQ9H606 182 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms