RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NXNQ6DKJ4 435 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 CYS1Q717R9 158 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 SNX32Q86XE0 403 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 DCLK2Q8N568 766 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 TDRD5Q8NAT2 981 aaKnown RBP12.77□□□□□ -0.36
CAPN1-208ENST00000527323 DNAJC1Q96KC8 554 aaKnown RBP12.77□□□□□ -0.36
CAPN1-208ENST00000527323 SPATA13Q96N96 652 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 QKIQ96PU8 341 aaKnown RBP eCLIP12.77□□□□□ -0.366e-6■■■■□ 20.5
CAPN1-208ENST00000527323 CSPG4P5Q96PW8 444 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 CDH19Q9H159 772 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 WDR55Q9H6Y2 383 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-208ENST00000527323 COPS7BQ9H9Q2 264 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-208ENST00000527323 TCF7L2Q9NQB0 619 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 SNX15Q9NRS6 342 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 KIAA1257Q9ULG3 409 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 HES2Q9Y543 173 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 SYNJ2BP-COX16A0A087WUM0 186 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 PAPSS1O43252 624 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 PEX1O43933 1283 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 POLBP06746 335 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 CTSHP09668 335 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 THRAP10827 490 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 SAT1P21673 171 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 ARL4AP40617 200 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 RGS2P41220 211 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 PKNOX1P55347 436 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 RBP5P82980 135 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 FLOT2Q14254 428 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 GNASQ5JWF2 1037 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 STEAP4Q687X5 459 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 LRRC8BQ6P9F7 803 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 PLD6Q8N2A8 252 aaKnown RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 PYROXD2Q8N2H3 581 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 AGAP3Q96P47 875 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 OR52B2Q96RD2 323 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 FERMT1Q9BQL6 677 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 GRIP2Q9C0E4 1043 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 DDX18Q9NVP1 670 aaKnown RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 COX16Q9P0S2 106 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 TBC1D30Q9Y2I9 924 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 SZT2Q5T011 3432 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 hCG_2014768A0A024R1R8 64 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 DPYSL4O14531 572 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 GAS2O43903 313 aaKnown RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 LCP1P13796 627 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 ENO3P13929 434 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 GOT1P17174 413 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 CCDC153Q494R4 210 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 OGFRL1Q5TC84 451 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 EPGNQ6UW88 154 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 STRA8Q7Z7C7 330 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 MAPK15Q8TD08 544 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 CLEC4CQ8WTT0 213 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 USP13Q92995 863 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 MOCOSQ96EN8 888 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 KCTD15Q96SI1 283 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 MPHOSPH6Q99547 160 aaKnown RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 DPP3Q9NY33 737 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 C6orf203Q9P0P8 240 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-208ENST00000527323 GJD2Q9UKL4 321 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 PCDHB12Q9Y5F1 795 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 PLXNB2O15031 1838 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.37
CAPN1-208ENST00000527323 MYO18AQ92614 2054 aaKnown RBP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 RNF103O00237 685 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 CASQ2O14958 399 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 PRKCGP05129 697 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 SRGAP2BP0DMP2 458 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 TGFB3P10600 412 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 MLNP12872 115 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 PSMB4P28070 264 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 IFRD2Q12894 506 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 PPM1LQ5SGD2 360 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 PID1Q7Z2X4 250 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 EXOC8Q8IYI6 725 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 KYQ8NBH2 561 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 PRPF18Q99633 342 aaKnown RBP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 C16orf70Q9BSU1 422 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 ABHD16BQ9H3Z7 469 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 CAB39LQ9H9S4 337 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 SNX9Q9Y5X1 595 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 KPNA7A9QM74 516 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 DNAJA2O60884 412 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 CD1EP15812 388 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 ACAT1P24752 427 aaKnown RBP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 PIK3R1P27986 724 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 SPRP35270 261 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 SNX16P57768 344 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 PPP2R5DQ14738 602 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 DPYSL2Q16555 572 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 SLC10A6Q3KNW5 377 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 GRTP1Q5TC63 336 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 C16orf89Q6UX73 402 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 NAPRTQ6XQN6 538 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 HACE1Q8IYU2 909 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 CCDC185Q8N715 623 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms