RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ARTNQ5T4W7 220 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 RSPH3Q86UC2 560 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 LRRTM3Q86VH5 581 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 CNTD1Q8N815 330 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 RBM15BQ8NDT2 890 aaKnown RBP17.95■□□□□ 0.46
USH1C-205ENST00000527020 ACBD6Q9BR61 282 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 CHRAC1Q9NRG0 131 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.95■□□□□ 0.46
USH1C-205ENST00000527020 TAGLN3Q9UI15 199 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 MAGED2Q9UNF1 606 aaPredicted RBP17.95■□□□□ 0.46
USH1C-205ENST00000527020 TTC3P53804 2025 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 NYNRINQ9P2P1 1898 aaKnown RBP17.95■□□□□ 0.46
USH1C-205ENST00000527020 ATP9BO43861 1147 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 KPNA6O60684 536 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 POMCP01189 267 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 JCHAINP01591 159 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 ODC1P11926 461 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 TPH1P17752 444 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 SERPINB6P35237 376 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 SPRP35270 261 aaPredicted RBP17.94■□□□□ 0.46
USH1C-205ENST00000527020 ABCG1P45844 678 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 PTDSS1P48651 473 aaKnown RBP17.94■□□□□ 0.46
USH1C-205ENST00000527020 SERPINB8P50452 374 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 HSP90AA5PQ58FG0 334 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 ITPRIPL1Q6GPH6 555 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 DCLRE1AQ6PJP8 1040 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 TMPRSS6Q8IU80 811 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 KLHDC8BQ8IXV7 354 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 MAB21L3Q8N8X9 362 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 OR10T2Q8NGX3 314 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 RILPQ96NA2 401 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 VAT1Q99536 393 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 SIKE1Q9BRV8 207 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 PNPOQ9NVS9 261 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 UBP1Q9NZI7 540 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 LRRC42Q9Y546 428 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 ARHGAP42A6NI28 874 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 ZNF195O14628 629 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 TNPO2O14787 897 aaKnown RBP17.94■□□□□ 0.46
USH1C-205ENST00000527020 LMNAP02545 664 aaKnown RBP17.94■□□□□ 0.46
USH1C-205ENST00000527020 CYP11A1P05108 521 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 RCN2Q14257 317 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 ARHGAP36Q6ZRI8 547 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 CLEC14AQ86T13 490 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 WDR75Q8IWA0 830 aaKnown RBP17.94■□□□□ 0.46
USH1C-205ENST00000527020 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.94■□□□□ 0.46
USH1C-205ENST00000527020 SCML4Q8N228 414 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 ACVR1CQ8NER5 493 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 SCAMP5Q8TAC9 235 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 HASPINQ8TF76 798 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 ZNF419Q96HQ0 510 aaPredicted RBP17.94■□□□□ 0.46
USH1C-205ENST00000527020 MYCBPQ99417 103 aaPredicted RBP17.94■□□□□ 0.46
USH1C-205ENST00000527020 CXorf56Q9H5V9 222 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 CAB39LQ9H9S4 337 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 RRAGCQ9HB90 399 aa17.94■□□□□ 0.46
USH1C-205ENST00000527020 MYO16Q9Y6X6 1858 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 MANSC4A6NHS7 340 aaPredicted RBP17.93■□□□□ 0.46
USH1C-205ENST00000527020 CACNG3O60359 315 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 ZNF623O75123 536 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 KRT36O76013 467 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 B3GAT3O94766 335 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 CD52P31358 61 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 PGM1P36871 562 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 NPY2RP49146 381 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 HARS2P49590 506 aaKnown RBP17.93■□□□□ 0.46
USH1C-205ENST00000527020 RAP1GDS1P52306 607 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 CLNS1AP54105 237 aaKnown RBP17.93■□□□□ 0.46
USH1C-205ENST00000527020 KDSRQ06136 332 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 DLG2Q15700 870 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 OTOP3Q7RTS5 596 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 GPATCH11Q8N954 259 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 OSBPL2Q9H1P3 480 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 DMAP1Q9NPF5 467 aaPredicted RBP17.93■□□□□ 0.46
USH1C-205ENST00000527020 PADI3Q9ULW8 664 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 SOX13Q9UN79 622 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.93■□□□□ 0.46
USH1C-205ENST00000527020 GPR182O15218 404 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 MAGEC1O60732 1142 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 RALBP11234 206 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 CYBAP13498 195 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 CPA3P15088 417 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 ALOX15P16050 662 aaPredicted RBP17.93■□□□□ 0.46
USH1C-205ENST00000527020 AOC1P19801 751 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 GRK2P25098 689 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 NMBRP28336 390 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 ZNF157P51786 506 aaPredicted RBP17.93■□□□□ 0.46
USH1C-205ENST00000527020 IRF9Q00978 393 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 ITGA9Q13797 1035 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 TBCCQ15814 346 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 CCDC153Q494R4 210 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 KCNMB4Q86W47 210 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 ARHGAP12Q8IWW6 846 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 TNS4Q8IZW8 715 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 ANKRD27Q96NW4 1050 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 TSGA13Q96PP4 275 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 IL22Q9GZX6 179 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 STN1Q9H668 368 aaKnown RBP17.93■□□□□ 0.46
USH1C-205ENST00000527020 ARHGEF38Q9NXL2 777 aa17.93■□□□□ 0.46
USH1C-205ENST00000527020 M0QZQ0 153 aa17.92■□□□□ 0.46
USH1C-205ENST00000527020 PGFP49763 221 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms