RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 AZIN2Q96A70 460 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 KLHDC7BQ96G42 594 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SLC39A13Q96H72 371 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 HSFY1Q96LI6 401 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SERPINB11Q96P15 392 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 NT5C1BQ96P26 610 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 NOX5Q96PH1 765 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 LGMNQ99538 433 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SIK2Q9H0K1 926 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 CPNE5Q9HCH3 593 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 ARHGAP20Q9P2F6 1191 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 ADAMTS1Q9UHI8 967 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 CYTH4Q9UIA0 394 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 KIAA1257Q9ULG3 409 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SCML1Q9UN30 329 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 TLR6Q9Y2C9 796 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 COQ4Q9Y3A0 265 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 PCDHGA1Q9Y5H4 931 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 SHROOM3Q8TF72 1996 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 ASPMQ8IZT6 3477 aa6.78□□□□□ -1.32
CD44-221ENST00000526000 A0A1W2PQU0 124 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 CPED1A4D0V7 1026 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 F5H5T6 163 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 K7ERQ8 282 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 KPNA3O00505 521 aaPredicted RBP6.77□□□□□ -1.33
CD44-221ENST00000526000 PAPSS1O43252 624 aaPredicted RBP6.77□□□□□ -1.33
CD44-221ENST00000526000 THAP12O43422 761 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 SNAP91O60641 907 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 USP12O75317 370 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 NEBLO76041 1014 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 FBXO21O94952 628 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 PCDH8O95206 1070 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 ADH1BP00325 375 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 MT-CO1P00395 513 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 PAEPP09466 180 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 THEGLP0DJG4 465 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 PLA2G2AP14555 144 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 CD44P16070 742 aaKnown RBP6.77□□□□□ -1.33
CD44-221ENST00000526000 DGKAP23743 735 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 TBXAS1P24557 533 aaPredicted RBP6.77□□□□□ -1.33
CD44-221ENST00000526000 ACTN2P35609 894 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 GPD2P43304 727 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 RXRGP48443 463 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 CENPCQ03188 943 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 CFHR1Q03591 330 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 TLE3Q04726 772 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 ENPEPQ07075 957 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 NME3Q13232 169 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 LY6DQ14210 128 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 RTP5Q14D33 572 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 ZNF658Q5TYW1 1059 aaPredicted RBP6.77□□□□□ -1.33
CD44-221ENST00000526000 OR6B2Q6IFH4 312 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 FBXL22Q6P050 247 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 PCSK4Q6UW60 755 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 KANSL1Q7Z3B3 1105 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 FMR1NBQ8N0W7 255 aaPredicted RBP6.77□□□□□ -1.33
CD44-221ENST00000526000 DEFB106AQ8N104 65 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 SCML4Q8N228 414 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 ATP6V0D2Q8N8Y2 350 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 CHST14Q8NCH0 376 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 FRS2Q8WU20 508 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 FAXDC2Q96IV6 333 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 KREMEN1Q96MU8 473 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 CALN1Q9BXU9 219 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 SEMA4CQ9C0C4 833 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 NRSN2Q9GZP1 204 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 TNKS2Q9H2K2 1166 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 UBE2TQ9NPD8 197 aaPredicted RBP6.77□□□□□ -1.33
CD44-221ENST00000526000 LMBRD1Q9NUN5 540 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 SLC12A6Q9UHW9 1150 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 VANGL2Q9ULK5 521 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 FZD4Q9ULV1 537 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 TMEM131Q92545 1883 aa6.77□□□□□ -1.33
CD44-221ENST00000526000 CKAP5Q14008 2032 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.76□□□□□ -1.33
CD44-221ENST00000526000 KCNU1A8MYU2 1149 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 E5RJQ4 531 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 E9PAM4 449 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 PRAMEF26H0Y7S4 382 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 BIN1O00499 593 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 CASC3O15234 703 aaKnown RBP6.76□□□□□ -1.33
CD44-221ENST00000526000 SLC16A3O15427 465 aaKnown RBP6.76□□□□□ -1.33
CD44-221ENST00000526000 KLK10O43240 276 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 SMAD6O43541 496 aaKnown RBP6.76□□□□□ -1.33
CD44-221ENST00000526000 OPA1O60313 960 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 CNTN5O94779 1100 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 SMC2O95347 1197 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 RRM1P23921 792 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 DNA2P51530 1060 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 TAS2R38P59533 333 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 MCCD1P59942 119 aaPredicted RBP6.76□□□□□ -1.33
CD44-221ENST00000526000 RNASE9P60153 205 aaKnown RBP6.76□□□□□ -1.33
CD44-221ENST00000526000 YWHAZP63104 245 aaKnown RBP6.76□□□□□ -1.33
CD44-221ENST00000526000 GABREP78334 506 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 CDK17Q00537 523 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 E2F1Q01094 437 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 APBA1Q02410 837 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 ZNF177Q13360 481 aaPredicted RBP6.76□□□□□ -1.33
CD44-221ENST00000526000 TCEA2Q15560 299 aa6.76□□□□□ -1.33
CD44-221ENST00000526000 ARHGAP44Q17R89 818 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms