RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 OR8D1Q8WZ84 308 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 PRMT1Q99873 361 aaKnown RBP24.68■■□□□ 1.54
USP47-205ENST00000525257 INTS2Q9H0H0 1204 aaKnown RBP24.68■■□□□ 1.54
USP47-205ENST00000525257 FAM204AQ9H8W3 233 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.68■■□□□ 1.54
USP47-205ENST00000525257 COX16Q9P0S2 106 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 ARHGAP20Q9P2F6 1191 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 SLC12A6Q9UHW9 1150 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 MAN1B1Q9UKM7 699 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 SARDHQ9UL12 918 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 CNTN6Q9UQ52 1028 aa24.68■■□□□ 1.54
USP47-205ENST00000525257 A0A1B0GVM2 712 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 TCAF2A6NFQ2 919 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 RABGAP1LQ5R372 815 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 CXorf57Q6NSI4 855 aaKnown RBP24.67■■□□□ 1.54
USP47-205ENST00000525257 KANSL1Q7Z3B3 1105 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 NELFBQ8WX92 580 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 FAM131CQ96AQ9 280 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 MED15Q96RN5 788 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 THAP9Q9H5L6 903 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 ACP6Q9NPH0 428 aa24.67■■□□□ 1.54
USP47-205ENST00000525257 DOCK9Q9BZ29 2069 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 ARID1BQ8NFD5 2236 aaPredicted RBP24.66■■□□□ 1.54
USP47-205ENST00000525257 THAP12O43422 761 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 MED7O43513 233 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 PLRG1O43660 514 aaKnown RBP24.66■■□□□ 1.54
USP47-205ENST00000525257 EIF2S3P41091 472 aaKnown RBP24.66■■□□□ 1.54
USP47-205ENST00000525257 CENPCQ03188 943 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 ACCSLQ4AC99 568 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 TTC39BQ5VTQ0 682 aaPredicted RBP24.66■■□□□ 1.54
USP47-205ENST00000525257 DSG4Q86SJ6 1040 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 TMEM110Q86TL2 294 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 TRIM59Q8IWR1 403 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 ZNF606Q8WXB4 792 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 KDM4CQ9H3R0 1056 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 UBE2TQ9NPD8 197 aaPredicted RBP24.66■■□□□ 1.54
USP47-205ENST00000525257 SLC25A13Q9UJS0 675 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 CTNND2Q9UQB3 1225 aa24.66■■□□□ 1.54
USP47-205ENST00000525257 KALRNO60229 2985 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 SLC7A4O43246 635 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 SDC3O75056 442 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 AFPP02771 609 aaKnown RBP24.65■■□□□ 1.54
USP47-205ENST00000525257 CKMT2P17540 419 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 GNA15P30679 374 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 PPP1R2P41236 205 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 PLK1P53350 603 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 CNTN1Q12860 1018 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 PDCLQ13371 301 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 EIF4EBP2Q13542 120 aaPredicted RBP24.65■■□□□ 1.54
USP47-205ENST00000525257 MEA1Q16626 185 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 AGBL4Q5VU57 503 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 FAM46CQ5VWP2 391 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 LRRC69Q6ZNQ3 347 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 IQCHQ86VS3 1027 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 RNF34Q969K3 372 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 TIGD1Q96MW7 591 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 RPRD1AQ96P16 312 aaPredicted RBP24.65■■□□□ 1.54
USP47-205ENST00000525257 UBL7Q96S82 380 aaPredicted RBP24.65■■□□□ 1.54
USP47-205ENST00000525257 HELZ2Q9BYK8 2649 aaKnown RBP24.65■■□□□ 1.54
USP47-205ENST00000525257 DDIT4Q9NX09 232 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 DMTF1Q9Y222 760 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 CA5BQ9Y2D0 317 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 SHROOM3Q8TF72 1996 aa24.65■■□□□ 1.54
USP47-205ENST00000525257 PPP1R3GB7ZBB8 358 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 IRAK1P51617 712 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 OXCT1P55809 520 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 CDK17Q00537 523 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 ILKQ13418 452 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 STAT4Q14765 748 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 RTP5Q14D33 572 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 FBXL22Q6P050 247 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 Q6ZVU0 165 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 TRIM69Q86WT6 500 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 DEFB106AQ8N104 65 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 OR52K2Q8NGK3 314 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 NRSN2Q9GZP1 204 aa24.64■■□□□ 1.54
USP47-205ENST00000525257 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.64■■□□□ 1.54
USP47-205ENST00000525257 C1QTNF3-AMACRE9PGA6 284 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 ATP9BO43861 1147 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 BNIP3LO60238 219 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 MAGEC1O60732 1142 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 PRB1P04280 392 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 SLC2A3P11169 496 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 ZNF18P17022 549 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 BMP6P22004 513 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 CCR1P32246 355 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 NUDT1P36639 197 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 STX17P56962 302 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 DLG2Q15700 870 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 SETMARQ53H47 684 aaPredicted RBP24.63■■□□□ 1.53
USP47-205ENST00000525257 ALG14Q96F25 216 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 VANGL2Q9ULK5 521 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 PPM1HQ9ULR3 514 aa24.63■■□□□ 1.53
USP47-205ENST00000525257 PTPRQQ9UMZ3 2332 aa24.62■■□□□ 1.53
USP47-205ENST00000525257 BICDL2A1A5D9 508 aa24.62■■□□□ 1.53
USP47-205ENST00000525257 RRP8O43159 456 aaKnown RBP24.62■■□□□ 1.53
USP47-205ENST00000525257 GRAP2O75791 330 aa24.62■■□□□ 1.53
USP47-205ENST00000525257 GGCXP38435 758 aa24.62■■□□□ 1.53
USP47-205ENST00000525257 OVGP1Q12889 678 aa24.62■■□□□ 1.53
USP47-205ENST00000525257 SLC2A13Q96QE2 648 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms