RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ZMYM5Q9UJ78 669 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 SORCS3Q9UPU3 1222 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 FAM50BQ9Y247 325 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 R3HDM2Q9Y2K5 976 aaKnown RBP6.67□□□□□ -1.34
CD44-214ENST00000525211 PIAS3Q9Y6X2 628 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 MIA3Q5JRA6 1907 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 DOCK4Q8N1I0 1966 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 NUP205Q92621 2012 aa6.67□□□□□ -1.34
CD44-214ENST00000525211 hCG_1818297A0A087WSY0 165 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 LRRD1A4D1F6 860 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 FAM86C2PA6NEL3 165 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 WASH4PA8MWX3 477 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 WASH3PC4AMC7 463 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 J3KR12 359 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 K7ERQ8 282 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 KRT86O43790 486 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 MFSD11O43934 449 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 GJB3O75712 270 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 ZMPSTE24O75844 475 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 LUC7L3O95232 432 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 NFATC1O95644 943 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 MT-CO1P00395 513 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 SLC2A3P11169 496 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 VAV1P15498 845 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 EPHB2P29323 1055 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 WASP42768 502 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 SLC1A1P43005 524 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 STK19P49842 368 aaPredicted RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 SEC13P55735 322 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 TPI1P60174 286 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 DYNLT1P63172 113 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 GAD2Q05329 585 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 IHHQ14623 411 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 SIX1Q15475 284 aaPredicted RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 MLF2Q15773 248 aaPredicted RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 MPPE1Q53F39 396 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 BOLA3Q53S33 107 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 ANKRD20A8PQ5CZ79 823 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 DGKKQ5KSL6 1271 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 LRRC38Q5VT99 294 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 RNF219Q5W0B1 726 aaPredicted RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 AFMIDQ63HM1 303 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 EGFLAMQ63HQ2 1017 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 KAZNQ674X7 775 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 CWF19L1Q69YN2 538 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 C1orf228Q6PIY5 440 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 LINGO4Q6UY18 593 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 PEX26Q7Z412 305 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 ADAT2Q7Z6V5 191 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 SPNS2Q8IVW8 549 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 RHOT1Q8IXI2 618 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 KATNAL2Q8IYT4 538 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 SIX5Q8N196 739 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 CPA6Q8N4T0 437 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 PLD5Q8N7P1 536 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 ZNF366Q8N895 744 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 RTL3Q8N8U3 475 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 KCTD6Q8NC69 237 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 CYB5D2Q8WUJ1 264 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 ATP2A3Q93084 1043 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 RNF166Q96A37 237 aaPredicted RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 E2F7Q96AV8 911 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 HAUS1Q96CS2 278 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 HMCESQ96FZ2 354 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 MYO19Q96H55 970 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 MS4A14Q96JA4 679 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 MRGPRX3Q96LB0 322 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 RNF157Q96PX1 679 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 CALN1Q9BXU9 219 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 TSGA10Q9BZW7 698 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 LRRC19Q9H756 370 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 LUC7LQ9NQ29 371 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 C11orf16Q9NQ32 467 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 TRPV5Q9NQA5 729 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 TMEM248Q9NWD8 314 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 THG1LQ9NWX6 298 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 PPARGC1AQ9UBK2 798 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 AMFRQ9UKV5 643 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 NDRG2Q9UN36 371 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 ZNF510Q9Y2H8 683 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 FCF1Q9Y324 198 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 GPSM3Q9Y4H4 160 aa6.66□□□□□ -1.34
CD44-214ENST00000525211 NYNRINQ9P2P1 1898 aaKnown RBP6.66□□□□□ -1.34
CD44-214ENST00000525211 NCOR1O75376 2440 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 KIAA1549LQ6ZVL6 1849 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 A0A1B0GVM2 712 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 TTC24A2A3L6 582 aaPredicted RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 TCAF2A6NFQ2 919 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 PDE2AO00408 941 aaPredicted RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 SLC9A3R1O14745 358 aaPredicted RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 ZSCAN12O43309 604 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 SMAD6O43541 496 aaKnown RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 PSTPIP1O43586 416 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 PEX11BO96011 259 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 DCNP07585 359 aaKnown RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 PABPC1P11940 636 aaKnown RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 RHOQP17081 205 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 CHKAP35790 457 aa6.65□□□□□ -1.34
CD44-214ENST00000525211 KIR2DL1P43626 348 aaPredicted RBP6.65□□□□□ -1.34
CD44-214ENST00000525211 PAPOLAP51003 745 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms