RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 TJP2Q9UDY2 1190 aa9.62□□□□□ -0.87
PTPN12-216ENST00000523952 SLCO3A1Q9UIG8 710 aa9.62□□□□□ -0.87
PTPN12-216ENST00000523952 SLC25A13Q9UJS0 675 aa9.62□□□□□ -0.87
PTPN12-216ENST00000523952 CA5BQ9Y2D0 317 aa9.62□□□□□ -0.87
PTPN12-216ENST00000523952 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
PTPN12-216ENST00000523952 ANKRD36A6QL64 1941 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 XPO1O14980 1071 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 BNIP3LO60238 219 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 PPFIA2O75334 1257 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 LUC7L3O95232 432 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 NR3C1P04150 777 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 LCP1P13796 627 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 CD19P15391 556 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 PRLRP16471 622 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 TGM2P21980 687 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 DRD3P35462 400 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 AFMP43652 599 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 GCLMP48507 274 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 VAMP7P51809 220 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 RPS24P62847 133 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 BST2Q10589 180 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 CLN3Q13286 438 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 ZNF177Q13360 481 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 SLC39A14Q15043 492 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 ZCCHC8Q6NZY4 707 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 FAM173BQ6P4H8 233 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 MMS22LQ6ZRQ5 1243 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 EFL1Q7Z2Z2 1120 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 PTAR1Q7Z6K3 402 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 CFAP52Q8N1V2 620 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 KLK6Q92876 244 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 GLMNQ92990 594 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 SGF29Q96ES7 293 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 MAGEF1Q9HAY2 307 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 PREBQ9HCU5 417 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 DYRK4Q9NR20 520 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 EXOC1Q9NV70 894 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 SEPT10Q9P0V9 454 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 IPO11Q9UI26 975 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 INTS6Q9UL03 887 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 ENTPD2Q9Y5L3 495 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 TLN1Q9Y490 2541 aaKnown RBP9.61□□□□□ -0.87
PTPN12-216ENST00000523952 DOCK4Q8N1I0 1966 aa9.61□□□□□ -0.87
PTPN12-216ENST00000523952 UTP20O75691 2785 aaKnown RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 USP9XQ93008 2570 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 CCDC187A0A096LP49 1063 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 YJEFN3A6XGL0 299 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 E7ENQ6 273 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 K7ESM1 405 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 RIOK3O14730 519 aaKnown RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 SCAMP1O15126 338 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 SPTLC2O15270 562 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 SUV39H1O43463 412 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 CALUO43852 315 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 TCEA3O75764 348 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 NEBLO76041 1014 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 PCDH8O95206 1070 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 MOCS2O96007 188 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 ITGB2P05107 769 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 FAM87AP0C7U9 286 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 RPIAP49247 311 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 NUMBP49757 651 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 STK19P49842 368 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 TLE1Q04724 770 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 SULT2A1Q06520 285 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 CNTN1Q12860 1018 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 UBAP2LQ14157 1087 aaKnown RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 SPIDRQ14159 915 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 FAM133BQ5BKY9 247 aaKnown RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 ZNF542PQ5EBM4 170 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 ARHGAP17Q68EM7 881 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 CNNM4Q6P4Q7 775 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 CRTC1Q6UUV9 634 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 DCP2Q8IU60 420 aaKnown RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 SLC9A9Q8IVB4 645 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 SLC4A11Q8NBS3 891 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 WDR48Q8TAF3 677 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 TAS1R2Q8TE23 839 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 PTPRN2Q92932 1015 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 TATDN2Q93075 761 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 USP28Q96RU2 1077 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 PPP1R9BQ96SB3 815 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 IL12RB2Q99665 862 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 APOBEC3GQ9HC16 384 aaKnown RBP9.6□□□□□ -0.87
PTPN12-216ENST00000523952 FZD3Q9NPG1 666 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 CNGB3Q9NQW8 809 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 CISHQ9NSE2 258 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 STARD5Q9NSY2 213 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 TSPAN16Q9UKR8 245 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 PAXBP1Q9Y5B6 917 aa9.6□□□□□ -0.87
PTPN12-216ENST00000523952 PVALEFA0A1B0GWK0 134 aa9.59□□□□□ -0.87
PTPN12-216ENST00000523952 A0A1W2PQU0 124 aa9.59□□□□□ -0.87
PTPN12-216ENST00000523952 A6NNZ2 444 aa9.59□□□□□ -0.87
PTPN12-216ENST00000523952 CDRT15L2A8MXV6 281 aa9.59□□□□□ -0.87
PTPN12-216ENST00000523952 MUSKO15146 869 aa9.59□□□□□ -0.87
PTPN12-216ENST00000523952 POLR2DO15514 142 aaKnown RBP9.59□□□□□ -0.87
PTPN12-216ENST00000523952 APOEP02649 317 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms