RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 NUMA1Q14980 2115 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 BUB1BO60566 1050 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-224ENST00000523873 ASLP04424 464 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 ATP5BP06576 529 aaKnown RBP13.15□□□□□ -0.3
VEGFA-224ENST00000523873 EPHX1P07099 455 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 CD48P09326 243 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 AMPD1P23109 780 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 MAN1A1P33908 653 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 MAPKAPK2P49137 400 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 VAV2P52735 878 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 PTPN5P54829 565 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 CDH6P55285 790 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 OXCT1P55809 520 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 CCZ1BP86790 482 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-224ENST00000523873 ECT2LQ008S8 904 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 GNA12Q03113 381 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 SRSF5Q13243 272 aaKnown RBP13.15□□□□□ -0.3
VEGFA-224ENST00000523873 SLC12A1Q13621 1099 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 ENPP2Q13822 863 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 TCEAL1Q15170 157 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 HADHQ16836 314 aaKnown RBP13.15□□□□□ -0.3
VEGFA-224ENST00000523873 BOLA3Q53S33 107 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 LINGO4Q6UY18 593 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 RFX8Q6ZV50 586 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 CACUL1Q86Y37 369 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 LRRC8AQ8IWT6 810 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 MDGA1Q8NFP4 955 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 HMGB4Q8WW32 186 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-224ENST00000523873 PRRX2Q99811 253 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 TMEM245Q9H330 911 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
VEGFA-224ENST00000523873 CATSPERBQ9H7T0 1116 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 CD248Q9HCU0 757 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
VEGFA-224ENST00000523873 VPS51Q9UID3 782 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
VEGFA-224ENST00000523873 DOCK9Q9BZ29 2069 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 TNRC6BQ9UPQ9 1833 aaKnown RBP13.14□□□□□ -0.31
VEGFA-224ENST00000523873 ILVBLA1L0T0 632 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 K7ERQ8 282 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 PJA2O43164 708 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 DAPK3O43293 454 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 APBB3O95704 486 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 MT-CO1P00395 513 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 VAV1P15498 845 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 ERCC2P18074 760 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 GABRG2P18507 467 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 COMTP21964 271 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 ARHGAP25P42331 645 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 ARSEP51690 589 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 DGKEP52429 567 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 ARF5P84085 180 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 KRT81Q14533 505 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 DPYSL2Q16555 572 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 IL31Q6EBC2 164 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 LEKR1Q6ZMV7 388 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 POLNQ7Z5Q5 900 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 PSTKQ8IV42 348 aaKnown RBP13.14□□□□□ -0.31
VEGFA-224ENST00000523873 TP53INP2Q8IXH6 220 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 NPWQ8N729 165 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 TEKT4Q8WW24 435 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 NELL1Q92832 810 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 ARHGEF2Q92974 986 aaKnown RBP13.14□□□□□ -0.31
VEGFA-224ENST00000523873 CELF6Q96J87 481 aaKnown RBP13.14□□□□□ -0.31
VEGFA-224ENST00000523873 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 KLC2Q9H0B6 622 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 ATP13A1Q9HD20 1204 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 POLMQ9NP87 494 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-224ENST00000523873 CD93Q9NPY3 652 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 ETNK2Q9NVF9 386 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 BCCIPQ9P287 314 aaKnown RBP eCLIP13.14□□□□□ -0.31
VEGFA-224ENST00000523873 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 INVSQ9Y283 1065 aa13.14□□□□□ -0.31
VEGFA-224ENST00000523873 A0A0A6YYK5 440 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-224ENST00000523873 WASH4PA8MWX3 477 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 H3BRJ5 948 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 CBX4O00257 560 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 FGF10O15520 208 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-224ENST00000523873 RAMP2O60895 175 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 SIN3BO75182 1162 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 ZMPSTE24O75844 475 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 SRPRAP08240 638 aaKnown RBP13.13□□□□□ -0.31
VEGFA-224ENST00000523873 NDUFV2P19404 249 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 ARL4AP40617 200 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 HADHBP55084 474 aaKnown RBP13.13□□□□□ -0.31
VEGFA-224ENST00000523873 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
VEGFA-224ENST00000523873 ST8SIA6P61647 398 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 KRT83P78385 493 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 DPYSQ14117 519 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 DPYSL3Q14195 570 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 GSE1Q14687 1217 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 ZNF528Q3MIS6 628 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 ZFYVE27Q5T4F4 411 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 RASSF3Q86WH2 238 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 ZNF354CQ86Y25 554 aa13.13□□□□□ -0.31
VEGFA-224ENST00000523873 CAMKK1Q8N5S9 505 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms