RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 MAGEA6P43360 314 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 NTHL1P78549 312 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 PARP6Q2NL67 630 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 TEX44Q53QW1 395 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 RABGAP1LQ5R372 815 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 ADGRF1Q5T601 910 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 RELL1Q8IUW5 271 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 PDIK1LQ8N165 341 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 PDCD7Q8N8D1 485 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 SHKBP1Q8TBC3 707 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 AZIN2Q96A70 460 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 ARL8AQ96BM9 186 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 SERPINB12Q96P63 405 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 WDR83Q9BRX9 315 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 SLC46A2Q9BY10 475 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 CENPHQ9H3R5 247 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 RSPH14Q9UHP6 348 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 IPO11Q9UI26 975 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 TTLL3Q9Y4R7 772 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 RAMP2O60895 175 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 ZNF189O75820 626 aaPredicted RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 RHOP08100 348 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 CCNB1P14635 433 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 PTPN2P17706 415 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 NFKB1P19838 968 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 TPSB2P20231 275 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 CD68P34810 354 aaPredicted RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 GRIA1P42261 906 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 TPSAB1Q15661 275 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 C5orf22Q49AR2 442 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 GPR158Q5T848 1215 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 PDE12Q6L8Q7 609 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 PPP1R21Q6ZMI0 780 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 ZSCAN18Q8TBC5 510 aaPredicted RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 ZNF419Q96HQ0 510 aaPredicted RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 GDF15Q99988 308 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 ZMYND15Q9H091 742 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 DONSONQ9NYP3 566 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 IGSF9Q9P2J2 1179 aa15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 RANBP2P49792 3224 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-236ENST00000522792 DENND4CQ5VZ89 1909 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 MYO7AQ13402 2215 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 EPOPA6NHQ4 379 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 ARHGAP42A6NI28 874 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 SMIM23A6NLE4 172 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 J3KR12 359 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 MATN3O15232 486 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 ALOX15BO15296 676 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 POLR3GO15318 223 aaPredicted RBP15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 GREM1O60565 184 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 RNF40O75150 1001 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 ACVRL1P37023 503 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 MAPKAPK2P49137 400 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 CBX1P83916 185 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 ZNF33AQ06730 810 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 POLD3Q15054 466 aaPredicted RBP15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 TEAD2Q15562 447 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 SLC5A9Q2M3M2 681 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 CAND1Q86VP6 1230 aaKnown RBP15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 CNTD1Q8N815 330 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 FBXO36Q8NEA4 188 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 TEKT5Q96M29 485 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 GORASP1Q9BQQ3 440 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 GBA3Q9H227 469 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 CFAP97Q9P2B7 532 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 MSRAQ9UJ68 235 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 TRHDEQ9UKU6 1024 aa15.79■□□□□ 0.12
CTNNA1-236ENST00000522792 E7ESA3 106 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 IFI35P80217 286 aaPredicted RBP15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 SLC7A9P82251 487 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 SPARCL1Q14515 664 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 KRT71Q3SY84 523 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 TTMPQ5BVD1 217 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 TIGD7Q6NT04 549 aaPredicted RBP15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 LEKR1Q6ZMV7 388 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 ZNF534Q76KX8 674 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 OTOP3Q7RTS5 596 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 GRASPQ7Z6J2 395 aaPredicted RBP15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 AGGF1Q8N302 714 aaeCLIP15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 OR52K2Q8NGK3 314 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 VAT1Q99536 393 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 TLE6Q9H808 572 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 SP110Q9HB58 689 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 CHMP2BQ9UQN3 213 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 ATG2AQ2TAZ0 1938 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 CCDC195A0A1B0GUA6 201 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 XYLBO75191 536 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 MOSPD3O75425 235 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 HNRNPA1P09651 372 aaKnown RBP eCLIP15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 HOXA9P31269 272 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 ELK3P41970 407 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 NRIP1P48552 1158 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 EPHA5P54756 1037 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 CDH4P55283 916 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 EIF3BP55884 814 aaKnown RBP15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 OLIG2Q13516 323 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 SKIDA1Q1XH10 827 aa15.78■□□□□ 0.12
CTNNA1-236ENST00000522792 KCTD16Q68DU8 428 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms