RNA–Protein interactions for RNA: ENST00000522702.5

FAM49B-222, Transcript of family with sequence similarity 49 member B, human

TSL 4

Gene FAM49B, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-222	ENST00000522702	PCDHB7	Q9Y5E2	793 aa		4.28	□□□□□ -1.72
FAM49B-222	ENST00000522702	PASK	Q96RG2	1323 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	TMEM232	C9JQI7	657 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702		F5H697	171 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	UBE2C	O00762	179 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	SYN3	O14994	580 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	DHH	O43323	396 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	TRIAP1	O43715	76 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	HEXIM1	O94992	359 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	BAG2	O95816	211 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	NR2F1	P10589	423 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	PPP3CB	P16298	524 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	TM4SF1	P30408	202 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	HOXC13	P31276	330 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	BSG	P35613	385 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	PNPLA4	P41247	253 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	GPD2	P43304	727 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	CPA2	P48052	419 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	CLK1	P49759	484 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	CDK7	P50613	346 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	PDE6C	P51160	858 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	UBXN2A	P68543	259 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	SP2	Q02086	613 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBL3	Q12788	808 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	PTP4A2	Q12974	167 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	BFSP2	Q13515	415 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	FHL3	Q13643	280 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	E2F2	Q14209	437 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	NAA25	Q14CX7	972 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	PRICKLE4	Q2TBC4	344 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	TMEM196	Q5HYL7	178 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	SLC10A5	Q5PT55	438 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	AKNAD1	Q5T1N1	836 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	CERCAM	Q5T4B2	595 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	DEPDC1	Q5TB30	811 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	MSANTD2	Q6P1R3	559 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	DENND1B	Q6P3S1	775 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	SHQ1	Q6PI26	577 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	INO80C	Q6PI98	192 aa	Predicted RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	SLC15A3	Q8IY34	581 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	CEP57L1	Q8IYX8	460 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	LRRC71	Q8N4P6	559 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	C11orf44	Q8N8P7	122 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	ZCCHC10	Q8TBK6	192 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	ACTRT2	Q8TDY3	377 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	NOC3L	Q8WTT2	800 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	RUFY2	Q8WXA3	655 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	ELP4	Q96EB1	424 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	SAAL1	Q96ER3	474 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	ZDHHC12	Q96GR4	267 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	PPP1R10	Q96QC0	940 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	EYA3	Q99504	573 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	PIP5K1A	Q99755	562 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	AIFM2	Q9BRQ8	373 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	DESI2	Q9BSY9	194 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	EDEM3	Q9BZQ6	932 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	CLPB	Q9H078	707 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	KLK15	Q9H2R5	256 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	PDE7B	Q9NP56	450 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	FBXO28	Q9NVF7	368 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	MRPL15	Q9P015	296 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	FOXJ2	Q9P0K8	574 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	MTRR	Q9UBK8	725 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	SEL1L	Q9UBV2	794 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	ZNF70	Q9UC06	446 aa	Predicted RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	RASAL2	Q9UJF2	1139 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	RAB21	Q9UL25	225 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	RCE1	Q9Y256	329 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	SNX14	Q9Y5W7	946 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	KCNE2	Q9Y6J6	123 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	FAM169A	Q9Y6X4	670 aa		4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	POLR2A	P24928	1970 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBC1D3D	A0A087WVF3	549 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBC1D3I	A0A087WXS9	549 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBC1D3E	A0A087X179	549 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBC1D3K	A0A087X1G2	549 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702		A0A1W2PQ09	198 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBC1D3B	A6NDS4	549 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	SH2D7	A6NKC9	451 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBC1D3L	B9A6J9	549 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702		M0QYT0	321 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	AGPS	O00116	658 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	SH2B2	O14492	632 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	HNRNPR	O43390	633 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	PROM1	O43490	865 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TNFSF14	O43557	240 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	C1QL1	O75973	258 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TBC1D3H	P0C7X1	549 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	PEPD	P12955	493 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	TNNT1	P13805	278 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	ATP6V1B1	P15313	513 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	ADORA2A	P29274	412 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	PSMB10	P40306	273 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	MSH2	P43246	934 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	FAM3B	P58499	235 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	PSMC6	P62333	389 aa		4.26	□□□□□ -1.73
FAM49B-222	ENST00000522702	GOLGA8DP	Q0D2H9	430 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms