RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 B3GNT8Q7Z7M8 397 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 C14orf80Q86SX3 495 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 SFR1Q86XK3 245 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 CBWD2Q8IUF1 395 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 TMEM145Q8NBT3 493 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 FBXO18Q8NFZ0 1043 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 FAM131CQ96AQ9 280 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 ANKRD36BP1Q96IX9 119 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 SDCBP2Q9H190 292 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 ADNPQ9H2P0 1102 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 SMYD3Q9H7B4 428 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 NLGN3Q9NZ94 848 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 SUN2Q9UH99 717 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 CYTH4Q9UIA0 394 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 GGA2Q9UJY4 613 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 SCN8AQ9UQD0 1980 aa9.23□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3DA0A087WVF3 549 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3IA0A087WXS9 549 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3EA0A087X179 549 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3KA0A087X1G2 549 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 CCDC187A0A096LP49 1063 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 CPED1A4D0V7 1026 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3FA6NER0 549 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3LB9A6J9 549 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 MTSS1O43312 755 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 RTN2O75298 545 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 REC8O95072 547 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3HP0C7X1 549 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 PABPC1P11940 636 aaKnown RBP9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 HGFP14210 728 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 ABCD1P33897 745 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 DCTP40126 519 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 ZNF177Q13360 481 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3GQ6DHY5 549 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3CQ6IPX1 549 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 EFL1Q7Z2Z2 1120 aaKnown RBP9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 ACOT1Q86TX2 421 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TBC1D3Q8IZP1 549 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 SLC22A18ASQ8N1D0 253 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 C12orf29Q8N999 325 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 SLC2A14Q8TDB8 520 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 WFIKKN2Q8TEU8 576 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 NANOS1Q8WY41 292 aaKnown RBP9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 C8orf76Q96K31 380 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 NOX5Q96PH1 765 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 OMDQ99983 421 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 MED10Q9BTT4 135 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 SLC12A9Q9BXP2 914 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 USP29Q9HBJ7 922 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 TIMMDC1Q9NPL8 285 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 ANAPC2Q9UJX6 822 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 INTS6Q9UL03 887 aaKnown RBP9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
TRAPPC9-212ENST00000521944 UNC13CQ8NB66 2214 aa9.21□□□□□ -0.93
TRAPPC9-212ENST00000521944 A1L4Q6 167 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 EME2A4GXA9 379 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 TTC34A8MYJ7 566 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 PLD2O14939 933 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 SEMA7AO75326 666 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 TNNC2P02585 160 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 CYBBP04839 570 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 UGT1A5P35504 534 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 KIF11P52732 1056 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 POLE2P56282 527 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 MYL6P60660 151 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 COG7P83436 770 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 EFEMP1Q12805 493 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 SFSWAPQ12872 951 aaKnown RBP9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 KCNAB2Q13303 367 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 STAT4Q14765 748 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZNF542PQ5EBM4 170 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 L1TD1Q5T7N2 865 aaKnown RBP9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 CLEC20AQ6ZU45 233 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 SND1Q7KZF4 910 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 RSRC2Q7L4I2 434 aaKnown RBP9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZFAND4Q86XD8 727 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 DTX1Q86Y01 620 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 AHI1Q8N157 1196 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 SPATA20Q8TB22 786 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 RAD54LQ92698 747 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 TTC17Q96AE7 1141 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 HVCN1Q96D96 273 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 KLHDC7BQ96G42 594 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZNF71Q9NQZ8 489 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 TBC1D7Q9P0N9 293 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 HMGXB4Q9UGU5 601 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 KLF15Q9UIH9 416 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 NAGPAQ9UK23 515 aa9.21□□□□□ -0.94
TRAPPC9-212ENST00000521944 A0A1B0GTH6 734 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 NTN3O00634 580 aaPredicted RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 EPB41L2O43491 1005 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 WIPF1O43516 503 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 MAGEC1O60732 1142 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 TBCAO75347 108 aaKnown RBP9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 TCEA3O75764 348 aa9.2□□□□□ -0.94
TRAPPC9-212ENST00000521944 ATP5BP06576 529 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms