RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 VDRP11473 427 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 TRIM21P19474 475 aaKnown RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 HOXC13P31276 330 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 CD96P40200 585 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 RPL34P49207 117 aaKnown RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 YWHAEP62258 255 aaKnown RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 SATB1Q01826 763 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 APBA1Q02410 837 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 CSTF1Q05048 431 aaKnown RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 BST2Q10589 180 aaKnown RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 BNIP3Q12983 259 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 DHCR24Q15392 516 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 MEA1Q16626 185 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 DGKKQ5KSL6 1271 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 PM20D1Q6GTS8 502 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 CC2D1AQ6P1N0 951 aaPredicted RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 TRIM65Q6PJ69 517 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 RHBDF2Q6PJF5 856 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 TSSK4Q6SA08 328 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 TMEM270Q6UE05 265 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 LCLAT1Q6UWP7 414 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 HTR3DQ70Z44 454 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 THAP5Q7Z6K1 395 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 ADGRG2Q8IZP9 1017 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 SCML4Q8N228 414 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 PPM1KQ8N3J5 372 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 SYNPOQ8N3V7 929 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 SUMF1Q8NBK3 374 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 SLC35F5Q8WV83 523 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 CD101Q93033 1021 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 OTUB2Q96DC9 234 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 IPO9Q96P70 1041 aaKnown RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 P2RY13Q9BPV8 354 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 MKRN2Q9H000 416 aaKnown RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 THAP9Q9H5L6 903 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 SIX2Q9NPC8 291 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 ACTR10Q9NZ32 417 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 CLIC5Q9NZA1 410 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 AJAP1Q9UKB5 411 aaPredicted RBP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 PCDHB10Q9UN67 800 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.2□□□□□ -1.42
SPIDR-216ENST00000521918 PCDHGA2Q9Y5H1 932 aa6.2□□□□□ -1.42
SPIDR-216ENST00000521918 ANTXRLA6NF34 631 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 BECN2A8MW95 431 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 H3BS24 57 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 K7EQS6 105 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 SLC9A3R1O14745 358 aaPredicted RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 MDM4O15151 490 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 HOXC11O43248 304 aaPredicted RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 KLF4O43474 513 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 STC2O76061 302 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 FGFR1OPO95684 399 aaKnown RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 ZBED1O96006 694 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 WNT11O96014 354 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 RARGP13631 454 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 CD19P15391 556 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 SLC9A1P19634 815 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 DRD1P21728 446 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 PON1P27169 355 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 HOXA6P31267 233 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 EIF2DP41214 584 aaKnown RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 GALK1P51570 392 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 CCR3P51677 355 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 TKTL1P51854 596 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 DAOAP59103 153 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 DMWDQ09019 674 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 GRSF1Q12849 480 aaKnown RBP eCLIP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 AUHQ13825 339 aaKnown RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 CNGA2Q16280 664 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 ANKRD39Q53RE8 183 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 CT47A1Q5JQC4 288 aaPredicted RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 LY6G5CQ5SRR4 150 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 XP32Q5T750 250 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 PMF1Q6P1K2 205 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 GJB7Q6PEY0 223 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 ZC3H14Q6PJT7 736 aaKnown RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 ZNF574Q6ZN55 896 aaPredicted RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 RRAGAQ7L523 313 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 TMC3Q7Z5M5 1100 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 SFTPA1Q8IWL2 248 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 BBS7Q8IWZ6 715 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 HNRNPLLQ8WVV9 542 aaKnown RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 KCTD13Q8WZ19 329 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 SHC3Q92529 594 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 CRACR2AQ9BSW2 395 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 FAM126AQ9BYI3 521 aaPredicted RBP6.19□□□□□ -1.42
SPIDR-216ENST00000521918 ULBP1Q9BZM6 244 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 DNAI2Q9GZS0 605 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 PRDM14Q9GZV8 571 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 EPC1Q9H2F5 836 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 SEMA4AQ9H3S1 761 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 ATP13A1Q9HD20 1204 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 ZSCAN32Q9NX65 697 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 TBC1D14Q9P2M4 693 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 APEX2Q9UBZ4 518 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 CYTH4Q9UIA0 394 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 NUDT5Q9UKK9 219 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 KIAA1257Q9ULG3 409 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 SLC5A6Q9Y289 635 aa6.19□□□□□ -1.42
SPIDR-216ENST00000521918 PCDHB4Q9Y5E5 795 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms