RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PER2O15055 1255 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 NARSO43776 548 aaKnown RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 TMCC2O75069 709 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 GJB3O75712 270 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 NPSP0C0P6 89 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 HKR1P10072 659 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 PKMP14618 531 aaKnown RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 DRD4P21917 467 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 PRKCHP24723 683 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 TYK2P29597 1187 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 RPS6KA3P51812 740 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 COPB1P53618 953 aaKnown RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 SIM1P81133 766 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 TAP1Q03518 808 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLC14A1Q13336 389 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 ALKBH1Q13686 389 aaKnown RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 ACVR2BQ13705 512 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 PDE1CQ14123 709 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 LARS2Q15031 903 aaKnown RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 RPE65Q16518 533 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLC18A3Q16572 532 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 PLAC9Q5JTB6 97 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 LY6G5CQ5SRR4 150 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 VWA5B1Q5TIE3 1220 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 NEK8Q86SG6 692 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 ADGRG6Q86SQ4 1221 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 TMEM200AQ86VY9 491 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 SRFBP1Q8NEF9 429 aaKnown RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 TBC1D5Q92609 795 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 KCNJ9Q92806 393 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 MPHOSPH8Q99549 860 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 CIPCQ9C0C6 399 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 SCPEP1Q9HB40 452 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 Q9N2J8 555 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 OSGIN2Q9Y236 505 aa3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 SIRT4Q9Y6E7 314 aaPredicted RBP3.75□□□□□ -1.81
HMGN1P28-201ENST00000521340 MCIDASD6RGH6 385 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 FIBPO43427 364 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF500O60304 480 aaPredicted RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 PLOD3O60568 738 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 OR2C1O95371 312 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 CHRM4P08173 479 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 NHLRC4P0CG21 123 aaPredicted RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 ACADMP11310 421 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 CYP4B1P13584 511 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 PORP16435 677 aaPredicted RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 CD72P21854 359 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLC8A1P32418 973 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 ACSL1P33121 698 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 HADHAP40939 763 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 HARS2P49590 506 aaKnown RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 RARRES1P49788 294 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 CCT8P50990 548 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 RPS3AP61247 264 aaKnown RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 RHAGQ02094 409 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 ABHD18Q0P651 414 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 DCTN2Q13561 401 aaKnown RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 MFSD13AQ14CX5 517 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 NAA25Q14CX7 972 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 GPR162Q16538 588 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 AP5B1Q2VPB7 878 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 DUSP28Q4G0W2 176 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 PCID2Q5JVF3 399 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 TBC1D9BQ66K14 1250 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 KCNV1Q6PIU1 500 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLC22A25Q6T423 547 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 ATF7IPQ6VMQ6 1270 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 TMTC2Q8N394 836 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLC44A3Q8N4M1 653 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 PAQR4Q8N4S7 273 aaPredicted RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 OR52N4Q8NGI2 321 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 NEU4Q8WWR8 484 aaPredicted RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 CELF1Q92879 486 aaKnown RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 CD180Q99467 661 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 ADGRE3Q9BY15 652 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 RANBP17Q9H2T7 1088 aaKnown RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLITRK6Q9H5Y7 841 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 EPHX3Q9H6B9 360 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 SEPT11Q9NVA2 429 aaKnown RBP3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 NKIRAS2Q9NYR9 191 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 NLKQ9UBE8 527 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 UPB1Q9UBR1 384 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 ST3GAL5Q9UNP4 418 aa3.74□□□□□ -1.81
HMGN1P28-201ENST00000521340 ADGRF5Q8IZF2 1346 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 CCDC151A5D8V7 595 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 H7C1Q1 480 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 SYN3O14994 580 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF202O95125 648 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 TTLL1O95922 423 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 COX7A2P14406 83 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 ALOX12P18054 663 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 WT1P19544 449 aaPredicted RBP3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 TGM2P21980 687 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 UBA7P41226 1012 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 PAFAH1B1P43034 410 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 PTPN9P43378 593 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 MPP3Q13368 585 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 IL13RA2Q14627 380 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 CNGA3Q16281 694 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms