RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 TACR2P21452 398 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 KDELR1P24390 212 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 MIPP30301 263 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 CCR1P32246 355 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 WASP42768 502 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 CXCL12P48061 93 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 PXNP49023 591 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 NR2C2P49116 596 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ARSEP51690 589 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ATXN1P54253 815 aaKnown RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ATP11AP98196 1134 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 OGDHQ02218 1023 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 NRG1Q02297 640 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 SLC25A11Q02978 314 aaKnown RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 DEUP1Q05D60 604 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 DMWDQ09019 674 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ZNF252P-AS1Q0IIN9 211 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 KLF1Q13351 362 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 DPYSL2Q16555 572 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 CDO1Q16878 200 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 C15orf59Q2T9L4 293 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ARL13BQ3SXY8 428 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 MPPE1Q53F39 396 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 RAB6CQ53S08 254 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ODF2Q5BJF6 829 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 TFDP3Q5H9I0 405 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 BRMS1LQ5PSV4 323 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 PIK3R6Q5UE93 754 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 EGFLAMQ63HQ2 1017 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 SND1Q7KZF4 910 aaKnown RBP eCLIP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 CIR1Q86X95 450 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 CFAP52Q8N1V2 620 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ALLCQ8N6M5 410 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ARFGAP1Q8N6T3 406 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ZNF513Q8N8E2 541 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ATP6V0D2Q8N8Y2 350 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 TXNDC5Q8NBS9 432 aaKnown RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 HJURPQ8NCD3 748 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 CCHCR1Q8TD31 782 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 SEC14L1Q92503 715 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 AZIN2Q96A70 460 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ERLEC1Q96DZ1 483 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 TMA16Q96EY4 203 aaKnown RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 C1orf74Q96LT6 269 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 HAPLN3Q96S86 360 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 ZNF670Q9BS34 389 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 RAB6CQ9H0N0 254 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 OSBPL2Q9H1P3 480 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 TMPRSS4Q9NRS4 437 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 STOML2Q9UJZ1 356 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 FBXO4Q9UKT5 387 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 RAB21Q9UL25 225 aa7.81□□□□□ -1.16
SDCBP-206ENST00000519115 RIF1Q5UIP0 2472 aaKnown RBP7.81□□□□□ -1.16
SDCBP-206ENST00000519115 PLXND1Q9Y4D7 1925 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 FAM187AA6NFU0 413 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 KCNU1A8MYU2 1149 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 CHURC1-FNTBB4DL54 471 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 BHMG1C9JSJ3 638 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 F5H5T6 163 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 I6L893 689 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 K7ESF4 209 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 SGK1O00141 431 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 PDE2AO00408 941 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ATP8B1O43520 1251 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 SRGAP2O75044 1071 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ADAM23O75077 832 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ATG13O75143 517 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 PAGE1O75459 146 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 CISD3P0C7P0 127 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 TDGF1P13385 188 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 HNRNPLP14866 589 aaKnown RBP eCLIP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 TNFRSF8P28908 595 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 STIP1P31948 543 aaKnown RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 RDXP35241 583 aaKnown RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 CDKN2BP42772 138 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 TNFRSF4P43489 277 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 KIR2DL1P43626 348 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 FNTBP49356 437 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 CXCR3P49682 368 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 NUMBP49757 651 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 IRAK1P51617 712 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 MRPS21P82921 87 aaKnown RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ZNF33AQ06730 810 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 DMC1Q14565 340 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 PPP2R5DQ14738 602 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 BRD3Q15059 726 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 GEN1Q17RS7 908 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 LONRF2Q1L5Z9 754 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 PREPLQ4J6C6 727 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-206ENST00000519115 MS4A13Q5J8X5 152 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 SH3PXD2AQ5TCZ1 1133 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 DCAF12L1Q5VU92 463 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 C4orf22Q6V702 233 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 BBS12Q6ZW61 710 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ANKS1BQ7Z6G8 1248 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 FAM131BQ86XD5 332 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 LRRC49Q8IUZ0 686 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 IL17RCQ8NAC3 791 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 KCTD6Q8NC69 237 aa7.8□□□□□ -1.16
SDCBP-206ENST00000519115 ATL2Q8NHH9 583 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms