RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TBC1D3DA0A087WVF3 549 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3IA0A087WXS9 549 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3EA0A087X179 549 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3KA0A087X1G2 549 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 GTPBP10A4D1E9 387 aaKnown RBP15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3FA6NER0 549 aaPredicted RBP15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TRABD2BA6NFA1 517 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 BECN2A8MW95 431 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3LB9A6J9 549 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 ATP9BO43861 1147 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 RFPL3O75679 317 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3HP0C7X1 549 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 HOXB3P14651 431 aaPredicted RBP15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 EPHA8P29322 1005 aaPredicted RBP15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 USP8P40818 1118 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 RXRGP48443 463 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 OVGP1Q12889 678 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 CAMK2BQ13554 666 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 ACAP1Q15027 740 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 ARHGAP44Q17R89 818 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 COL28A1Q2UY09 1125 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3GQ6DHY5 549 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3CQ6IPX1 549 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 C19orf48Q6RUI8 117 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 C11orf57Q6ZUT1 292 aaPredicted RBP15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 PRPF39Q86UA1 669 aaKnown RBP15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 PDZD3Q86UT5 571 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 IQCHQ86VS3 1027 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 GATAD2AQ86YP4 633 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 TBC1D3Q8IZP1 549 aaPredicted RBP15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 DEFB106AQ8N104 65 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 MFSD2AQ8NA29 543 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 SAP25Q8TEE9 199 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 NXPE2Q96DL1 559 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 CNDP2Q96KP4 475 aaKnown RBP15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 CPXM1Q96SM3 734 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 CRACR2AQ9BSW2 395 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 RRN3Q9NYV6 651 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 RWDD2AQ9UIY3 292 aa15.03■□□□□ -0
SCARNA20.5-201ENST00000516991 SYNJ2BP-COX16A0A087WUM0 186 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 TLR4O00206 839 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 PLRG1O43660 514 aaKnown RBP15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 CLDN11O75508 207 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 DAB1O75553 588 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 VAV1P15498 845 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 PPP2CBP62714 309 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 PPP2CAP67775 309 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 CENPCQ03188 943 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 PTK2Q05397 1052 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 CYP4F3Q08477 520 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 ZNF177Q13360 481 aaPredicted RBP15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 AUHQ13825 339 aaKnown RBP15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 TAF5Q15542 800 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 EXOC3L4Q17RC7 722 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 FBXL22Q6P050 247 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 GJB7Q6PEY0 223 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 SLC26A9Q7LBE3 791 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 TRIM69Q86WT6 500 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 CCDC114Q96M63 670 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 ACP6Q9NPH0 428 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 TMEM51Q9NW97 253 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 COX16Q9P0S2 106 aa15.02■□□□□ -0
SCARNA20.5-201ENST00000516991 NBEAQ8NFP9 2946 aa15.02□□□□□ -0.01
SCARNA20.5-201ENST00000516991 FAM149AA5PLN7 773 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 NOS2P35228 1153 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 ACADVLP49748 655 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 ILKQ13418 452 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 SHBQ15464 509 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 ACCSLQ4AC99 568 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 SETMARQ53H47 684 aaPredicted RBP15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 OR6B2Q6IFH4 312 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 OLFML1Q6UWY5 402 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 FAM183BPQ6ZVS7 135 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 ZDHHC17Q8IUH5 632 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 PASD1Q8IV76 773 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 C1orf131Q8NDD1 294 aaKnown RBP15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 ZNF397Q8NF99 534 aaPredicted RBP15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 ALG14Q96F25 216 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 FEM1AQ9BSK4 669 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 SYNCQ9H7C4 482 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 PREBQ9HCU5 417 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 VPS28Q9UK41 221 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 VANGL2Q9ULK5 521 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 PAXBP1Q9Y5B6 917 aa15.01□□□□□ -0.01
SCARNA20.5-201ENST00000516991 A0A087WV48 116 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 WNT9AO14904 365 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 MCF2LO15068 1137 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 RTN2O75298 545 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 GRAP2O75791 330 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 ZNF18P17022 549 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 SLC9A1P19634 815 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 KRT9P35527 623 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 CDH4P55283 916 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 KRT83P78385 493 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 CCDC15Q0P6D6 951 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 NME3Q13232 169 aa15□□□□□ -0.01
SCARNA20.5-201ENST00000516991 DLG2Q15700 870 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms