RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 TSHRP16473 764 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 CD53P19397 219 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 PDCP20941 246 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 SHC1P29353 583 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 TYK2P29597 1187 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 AVPR1AP37288 418 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 FUT6P51993 359 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 DGKQP52824 942 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 ACOX1Q15067 660 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 SF3A1Q15459 793 aaKnown RBP0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 ELF2Q15723 593 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 SNAI3Q3KNW1 292 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 ZNF783Q6ZMS7 281 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 KIAA0907Q7Z7F0 614 aaPredicted RBP0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 LRRTM1Q86UE6 522 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 SPATS2Q86XZ4 545 aaKnown RBP0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 EXD3Q8N9H8 876 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 LNX1Q8TBB1 728 aaPredicted RBP0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 ZNF473Q8WTR7 871 aaKnown RBP0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 TXNDC15Q96J42 360 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 ART5Q96L15 291 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 TRIM54Q9BYV2 358 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 DPH1Q9BZG8 443 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 LRRC4Q9HBW1 653 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 ZDHHC18Q9NUE0 388 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 TAAR2Q9P1P5 351 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 LRFN1Q9P244 771 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 B3GNT3Q9Y2A9 372 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 SLC45A1Q9Y2W3 748 aa0.64□□□□□ -2.31
SCARNA23-201ENST00000516060 TNFSF12-TNFSF13A0A0A6YY99 330 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 ITM2AO43736 263 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 PPP6R2O75170 966 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 IGKV3-15P01624 115 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 SLC5A1P13866 664 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 PBX1P40424 430 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 TMPRSS3P57727 454 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 KRTAP10-10P60014 251 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 DHX34Q14147 1143 aaKnown RBP0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 FAM166AQ6J272 317 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 Q6ZR54 194 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 MON1BQ7L1V2 547 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 NFE4Q86UQ8 179 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 LMNTD2Q8IXW0 634 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 FSTL5Q8N475 847 aaPredicted RBP0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 DMBX1Q8NFW5 382 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 OR52L2PQ8NGH6 319 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 OR10V1Q8NGI7 309 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 OR56A3Q8NH54 315 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 RFWD2Q8NHY2 731 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 KBTBD7Q8WVZ9 684 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 SPSB4Q96A44 273 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 ALG14Q96F25 216 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 ZDHHC12Q96GR4 267 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 LRR1Q96L50 414 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 ABHD14AQ9BUJ0 271 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 EPS8L2Q9H6S3 715 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 SMURF2Q9HAU4 748 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 ZNF304Q9HCX3 659 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 PIH1D1Q9NWS0 290 aaKnown RBP0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 DLGAP2Q9P1A6 1054 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 SRPRBQ9Y5M8 271 aaKnown RBP0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 PCNX3Q9H6A9 2034 aa0.63□□□□□ -2.31
SCARNA23-201ENST00000516060 DYTNA2CJ06 578 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 MSI1O43347 362 aaKnown RBP0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 DCXO43602 365 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 CDC45O75419 566 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 CNTN5O94779 1100 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 IL18RAPO95256 599 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 MT-CO1P00395 513 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 ZNF26P17031 533 aaPredicted RBP0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 EN2P19622 333 aaPredicted RBP0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 TGM2P21980 687 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 YY1P25490 414 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 SLC13A2Q13183 592 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 RAB32Q13637 225 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 ENPP2Q13822 863 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 ARHGEF7Q14155 803 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 MYBPC2Q14324 1141 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 GALNT3Q14435 633 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 CCDC157Q569K6 752 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 HEPHL1Q6MZM0 1159 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 DSG4Q86SJ6 1040 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 FAM185AQ8N0U4 392 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 LRRC57Q8N9N7 239 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 CMASQ8NFW8 434 aaPredicted RBP0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 PLBD2Q8NHP8 589 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 SUN3Q8TAQ9 357 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 WDR66Q8TBY9 1149 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 TMEM163Q8TC26 289 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 SLC35F5Q8WV83 523 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 TAAR8Q969N4 342 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 MOCOSQ96EN8 888 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 SELENOOQ9BVL4 669 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 DHX36Q9H2U1 1008 aaKnown RBP0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 ARMT1Q9H993 441 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 A1CFQ9NQ94 594 aaKnown RBP0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 CNNM1Q9NRU3 951 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 TMEM160Q9NX00 188 aa0.62□□□□□ -2.31
SCARNA23-201ENST00000516060 CGNL1Q0VF96 1302 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms