RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 DEUP1Q05D60 604 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 SYCP1Q15431 976 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 RAB6CQ53S08 254 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 CFAP57Q96MR6 1250 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 CAMK1GQ96NX5 476 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 PCDHB18PQ96TA0 734 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 TMEM121BQ9BXQ6 578 aaPredicted RBP18.18■□□□□ 0.5
SFXN1-212ENST00000515791 RAB6CQ9H0N0 254 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 SLC32A1Q9H598 525 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 NLRC4Q9NPP4 1024 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 FZD4Q9ULV1 537 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 DAAM1Q9Y4D1 1078 aa18.18■□□□□ 0.5
SFXN1-212ENST00000515791 DOCK4Q8N1I0 1966 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-212ENST00000515791 A0A1B0GVT2 93 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 LGALS16A8MUM7 142 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 GOLGA8SH3BPF8 625 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 RNASEH1O60930 286 aaKnown RBP18.17■□□□□ 0.5
SFXN1-212ENST00000515791 CBFA2T3O75081 653 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 ZNF883P0CG24 379 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 CD27P26842 260 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 CSNK1EP49674 416 aaKnown RBP18.17■□□□□ 0.5
SFXN1-212ENST00000515791 ZNF177Q13360 481 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-212ENST00000515791 ELAVL3Q14576 367 aaKnown RBP18.17■□□□□ 0.5
SFXN1-212ENST00000515791 STX1AQ16623 288 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 KCNT1Q5JUK3 1230 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 RNF219Q5W0B1 726 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-212ENST00000515791 KIAA0895LQ68EN5 471 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 SASS6Q6UVJ0 657 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 SH2D3CQ8N5H7 860 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 SARDHQ9UL12 918 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 NCKAP1Q9Y2A7 1128 aa18.17■□□□□ 0.5
SFXN1-212ENST00000515791 MAP1BP46821 2468 aaKnown RBP18.17■□□□□ 0.5
SFXN1-212ENST00000515791 TMEM131Q92545 1883 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 USP24Q9UPU5 2620 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 FSBPO95073 299 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 MT-CO1P00395 513 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 SPINK2P20155 84 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 C5AR1P21730 350 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 AFF3P51826 1226 aaKnown RBP18.16■□□□□ 0.5
SFXN1-212ENST00000515791 FOXC1Q12948 553 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 KIF19Q2TAC6 998 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 HLA-BQ31612 363 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 FKBP15Q5T1M5 1219 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 NCEH1Q6PIU2 408 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 EMC1Q8N766 993 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 SNX19Q92543 992 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 SPAG5Q96R06 1193 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 ERGIC2Q96RQ1 377 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 HAPLN3Q96S86 360 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 GAREM1Q9H706 876 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 METTL5Q9NRN9 209 aaKnown RBP18.16■□□□□ 0.5
SFXN1-212ENST00000515791 TMEM51Q9NW97 253 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 TMEM63CQ9P1W3 806 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 HS3ST2Q9Y278 367 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 FNDC3AQ9Y2H6 1198 aaKnown RBP18.16■□□□□ 0.5
SFXN1-212ENST00000515791 SNX11Q9Y5W9 270 aa18.16■□□□□ 0.5
SFXN1-212ENST00000515791 A0A1W2PPC4 97 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 E9PAM4 449 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 RNASEH2AO75792 299 aaKnown RBP18.15■□□□□ 0.5
SFXN1-212ENST00000515791 ADH1BP00325 375 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 SRCP12931 536 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 GOT1P17174 413 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 RDXP35241 583 aaKnown RBP18.15■□□□□ 0.5
SFXN1-212ENST00000515791 NNMTP40261 264 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 STAT1P42224 750 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 GRIA4P48058 902 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 PSMD8P48556 350 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 GSCP56915 257 aaPredicted RBP18.15■□□□□ 0.5
SFXN1-212ENST00000515791 SIM1P81133 766 aaPredicted RBP18.15■□□□□ 0.5
SFXN1-212ENST00000515791 DLG2Q15700 870 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 CCDC183Q5T5S1 534 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 LAYNQ6UX15 382 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 SND1Q7KZF4 910 aaKnown RBP eCLIP18.15■□□□□ 0.5
SFXN1-212ENST00000515791 FAM131BQ86XD5 332 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 NAXDQ8IW45 347 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 OR2T34Q8NGX1 318 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 JOSD2Q8TAC2 188 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 SLC30A5Q8TAD4 765 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 BAHD1Q8TBE0 780 aaPredicted RBP18.15■□□□□ 0.5
SFXN1-212ENST00000515791 PPP1R9BQ96SB3 815 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 MPP6Q9NZW5 540 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 ANKRD6Q9Y2G4 727 aa18.15■□□□□ 0.5
SFXN1-212ENST00000515791 A0A0D9SEW6 157 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 C2CD4BA6NLJ0 364 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 WNT9AO14904 365 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 SNAP91O60641 907 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 GJB6O95452 261 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 MBD3O95983 291 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 WNT1P04628 370 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 ATP1A3P13637 1013 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 ADPRHP54922 357 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 CCDC14Q49A88 953 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 ACBD5Q5T8D3 534 aaPredicted RBP18.14■□□□□ 0.49
SFXN1-212ENST00000515791 MANEALQ5VSG8 457 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 IL27RAQ6UWB1 636 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 PHLDB2Q86SQ0 1253 aa18.14■□□□□ 0.49
SFXN1-212ENST00000515791 SETD3Q86TU7 594 aaPredicted RBP18.14■□□□□ 0.49
SFXN1-212ENST00000515791 CENPIQ92674 756 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms