RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PCDHA12Q9UN75 941 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 COPG1Q9Y678 874 aaKnown RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 ARHGEF11O15085 1522 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 KCNJ18B7U540 433 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 ZNF814B7Z6K7 855 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 KIF28PB7ZC32 967 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 PRSS44E7EML9 344 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 TULP3O75386 442 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 TNFRSF1BP20333 461 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 MCM2P49736 904 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 ADPRHP54922 357 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 AP2B1P63010 937 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 IRX6P78412 446 aaPredicted RBP3.59□□□□□ -1.83
HERC4-215ENST00000515753 DLGAP5Q15398 846 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 BTBD16Q32M84 506 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 ASPHD1Q5U4P2 390 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 DAB2IPQ5VWQ8 1189 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 ANKRD40Q6AI12 368 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 Q6ZTC4 211 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 USP43Q70EL4 1123 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 MDGA2Q7Z553 956 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 DDIASQ8IXT1 998 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 MMP21Q8N119 569 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 ENDOVQ8N8Q3 282 aaKnown RBP3.59□□□□□ -1.83
HERC4-215ENST00000515753 ZBTB8BQ8NAP8 495 aaPredicted RBP3.59□□□□□ -1.83
HERC4-215ENST00000515753 PPHLN1Q8NEY8 458 aaKnown RBP3.59□□□□□ -1.83
HERC4-215ENST00000515753 GCC1Q96CN9 775 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 MSI2Q96DH6 328 aaKnown RBP3.59□□□□□ -1.83
HERC4-215ENST00000515753 MPP4Q96JB8 637 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 ABHD14AQ9BUJ0 271 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 MECRQ9BV79 373 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 THSD1Q9NS62 852 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 DACT1Q9NYF0 836 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 C9orf78Q9NZ63 289 aaPredicted RBP3.59□□□□□ -1.83
HERC4-215ENST00000515753 MSRB1Q9NZV6 116 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 NDUFAF4Q9P032 175 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 IPO11Q9UI26 975 aaKnown RBP3.59□□□□□ -1.83
HERC4-215ENST00000515753 TRPC5Q9UL62 973 aaPredicted RBP3.59□□□□□ -1.83
HERC4-215ENST00000515753 DAPP1Q9UN19 280 aa3.59□□□□□ -1.83
HERC4-215ENST00000515753 SOGA1O94964 1423 aa3.59□□□□□ -1.84
HERC4-215ENST00000515753 CCDC88BA6NC98 1476 aa3.59□□□□□ -1.84
HERC4-215ENST00000515753 TOPBP1Q92547 1522 aa3.59□□□□□ -1.84
HERC4-215ENST00000515753 KIF21AQ7Z4S6 1674 aa3.59□□□□□ -1.84
HERC4-215ENST00000515753 MCIDASD6RGH6 385 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 SPTLC2O15270 562 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 ATG13O75143 517 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 EPN2O95208 641 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 LCKP06239 509 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 T-ENOLP0DO92 83 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 VEGFAP15692 232 aaPredicted RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 TBXAS1P24557 533 aaPredicted RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 ALDH7A1P49419 539 aaKnown RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 TBX2Q13207 712 aaPredicted RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 TRIM14Q14142 442 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 SIM2Q14190 667 aaPredicted RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 KRTAP27-1Q3LI81 207 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 ZNF569Q5MCW4 686 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 VWA5B1Q5TIE3 1220 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 JAKMIP3Q5VZ66 844 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 DGAT2L7PQ6IED9 249 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 LVRNQ6Q4G3 990 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 LDHAL6AQ6ZMR3 332 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 KRBA2Q6ZNG9 492 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 OTUD7AQ8TE49 926 aaPredicted RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 HMGB4Q8WW32 186 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 CPT1BQ92523 772 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 PPP1R10Q96QC0 940 aaKnown RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 ZPBPQ9BS86 351 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 PAGR1Q9BTK6 254 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 SCNM1Q9BWG6 230 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 TMEM120AQ9BXJ8 343 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 TMX4Q9H1E5 349 aaPredicted RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 MYLK2Q9H1R3 596 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 IL21RQ9HBE5 538 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 SLC22A11Q9NSA0 550 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 RAB21Q9UL25 225 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 SLC12A4Q9UP95 1085 aa3.58□□□□□ -1.84
HERC4-215ENST00000515753 AQRO60306 1485 aaKnown RBP eCLIP3.58□□□□□ -1.84
HERC4-215ENST00000515753 ZNF608Q9ULD9 1512 aaPredicted RBP3.58□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3DA0A087WVF3 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3IA0A087WXS9 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3EA0A087X179 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3KA0A087X1G2 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3BA6NDS4 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3FA6NER0 549 aaPredicted RBP3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3LB9A6J9 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 WIZO95785 1651 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 ALDOCP09972 364 aaKnown RBP3.57□□□□□ -1.84
HERC4-215ENST00000515753 TBC1D3HP0C7X1 549 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 CST5P28325 142 aaPredicted RBP3.57□□□□□ -1.84
HERC4-215ENST00000515753 CHKAP35790 457 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 STAT1P42224 750 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 RCAN1P53805 252 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 SHC2P98077 582 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 SETQ01105 290 aaPredicted RBP3.57□□□□□ -1.84
HERC4-215ENST00000515753 HYAL1Q12794 435 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 DCTN1Q14203 1278 aa3.57□□□□□ -1.84
HERC4-215ENST00000515753 INPP5JQ15735 1006 aaPredicted RBP3.57□□□□□ -1.84
HERC4-215ENST00000515753 TUBB8Q3ZCM7 444 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms