RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 TMEM8BA6NDV4 472 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 HYAL3O43820 417 aaPredicted RBP17.97■□□□□ 0.47
DDX41-217ENST00000515562 ATP9BO43861 1147 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 ADCY5O95622 1261 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 TOP3BO95985 862 aaKnown RBP17.97■□□□□ 0.47
DDX41-217ENST00000515562 IL1BP01584 269 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 MMEP08473 750 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 TFE3P19532 575 aaPredicted RBP17.97■□□□□ 0.47
DDX41-217ENST00000515562 NUMBP49757 651 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 IRAK1P51617 712 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 ADPRHP54922 357 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 RACK1P63244 317 aaKnown RBP17.97■□□□□ 0.47
DDX41-217ENST00000515562 KRT31Q15323 416 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 NAA35Q5VZE5 725 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 LRRC31Q6UY01 552 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 GLRX5Q86SX6 157 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 SETD7Q8WTS6 366 aaKnown RBP17.97■□□□□ 0.47
DDX41-217ENST00000515562 OR8D1Q8WZ84 308 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 SKA1Q96BD8 255 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 TBCBQ99426 244 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 ORAI3Q9BRQ5 295 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 C2orf49Q9BVC5 232 aaPredicted RBP17.97■□□□□ 0.47
DDX41-217ENST00000515562 ACE2Q9BYF1 805 aaPredicted RBP17.97■□□□□ 0.47
DDX41-217ENST00000515562 MUC3BQ9H195 1237 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 VPS16Q9H269 839 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 OR51B4Q9Y5P0 310 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 SNX11Q9Y5W9 270 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 GOLGA6L22H0YM25 854 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 GOLGA8SH3BPF8 625 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 ALOX15BO15296 676 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 SLC7A4O43246 635 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 CBFA2T3O75081 653 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 RHOCP08134 193 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 C1QTNF9P0C862 333 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 VAV1P15498 845 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 FLT3P36888 993 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 CCT8P50990 548 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 CCR5P51681 352 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 KRT83P78385 493 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 SUZ12Q15022 739 aaKnown RBP17.96■□□□□ 0.47
DDX41-217ENST00000515562 ACCSLQ4AC99 568 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 FAM46CQ5VWP2 391 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 ARCQ7LC44 396 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 C14orf80Q86SX3 495 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 SETD3Q86TU7 594 aaPredicted RBP17.96■□□□□ 0.47
DDX41-217ENST00000515562 ANKRD20A12PQ8NF67 263 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 OR52K2Q8NGK3 314 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 GPT2Q8TD30 523 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 C1orf74Q96LT6 269 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 TMEM121BQ9BXQ6 578 aaPredicted RBP17.96■□□□□ 0.47
DDX41-217ENST00000515562 FAM207AQ9NSI2 230 aaPredicted RBP17.96■□□□□ 0.47
DDX41-217ENST00000515562 NOCTQ9UK39 431 aaKnown RBP17.96■□□□□ 0.47
DDX41-217ENST00000515562 APOBEC2Q9Y235 224 aaKnown RBP17.96■□□□□ 0.47
DDX41-217ENST00000515562 HS3ST2Q9Y278 367 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 MSRB2Q9Y3D2 182 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 PLXNA2O75051 1894 aa17.96■□□□□ 0.47
DDX41-217ENST00000515562 TMEM131Q92545 1883 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 C10orf142B7Z368 130 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 C1QTNF3-AMACRE9PGA6 284 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 I6L893 689 aaPredicted RBP17.95■□□□□ 0.46
DDX41-217ENST00000515562 VILLO15195 856 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 DFNA5O60443 496 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 GFPT2O94808 682 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 FTH1P19P0C7X4 201 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 DRD3P35462 400 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 C21orf59P57076 290 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 POLR2FP61218 127 aaKnown RBP17.95■□□□□ 0.46
DDX41-217ENST00000515562 CDR2Q01850 454 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 ALFQ53S48 1182 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 C6orf118Q5T5N4 469 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 SASS6Q6UVJ0 657 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 LAYNQ6UX15 382 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 DBX2Q6ZNG2 339 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 RAB44Q7Z6P3 723 aaPredicted RBP17.95■□□□□ 0.46
DDX41-217ENST00000515562 ZNF683Q8IZ20 524 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 SH2D3CQ8N5H7 860 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 DCAF4L2Q8NA75 395 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 OR14C36Q8NHC7 312 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 CPA5Q8WXQ8 436 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 GATA6Q92908 595 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 FAM131CQ96AQ9 280 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 CCDC114Q96M63 670 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 SLC6A18Q96N87 628 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 CDC6Q99741 560 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 KDM4CQ9H3R0 1056 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 ANLNQ9NQW6 1124 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 ANO10Q9NW15 660 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 TMEM59LQ9UK28 342 aa17.95■□□□□ 0.46
DDX41-217ENST00000515562 TP53BP1Q12888 1972 aaPredicted RBP17.94■□□□□ 0.46
DDX41-217ENST00000515562 IGLV3-10A0A075B6K4 115 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 KRT37O76014 449 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 CNTN5O94779 1100 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 ZNF18P17022 549 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 SOX5P35711 763 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 CTSKP43235 329 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 JAM2P57087 298 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 MYL5Q02045 173 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 DLG2Q15700 870 aa17.94■□□□□ 0.46
DDX41-217ENST00000515562 STX1AQ16623 288 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms