RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PPP2R5DQ14738 602 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 PCLAFQ15004 111 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 DNAL1Q4LDG9 190 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 FAM26DQ5JW98 314 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 BTBD8Q5XKL5 378 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 PDPK2PQ6A1A2 396 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 TLDC1Q6P9B6 456 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 SPATA2LQ8IUW3 424 aaPredicted RBP15.16■□□□□ 0.02
NUP54-217ENST00000514987 DCLK2Q8N568 766 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 TEX9Q8N6V9 391 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 NETO2Q8NC67 525 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 NSMCE1Q8WV22 266 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 DPF3Q92784 378 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 RILPQ96NA2 401 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 MIPEPQ99797 713 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 MLPHQ9BV36 600 aaPredicted RBP15.16■□□□□ 0.02
NUP54-217ENST00000514987 SNX15Q9NRS6 342 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 PIH1D1Q9NWS0 290 aaKnown RBP15.16■□□□□ 0.02
NUP54-217ENST00000514987 COPG2Q9UBF2 871 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 TAGLN3Q9UI15 199 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 PCDHB8Q9UN66 801 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 ANKRD6Q9Y2G4 727 aa15.16■□□□□ 0.02
NUP54-217ENST00000514987 TDRD15B5MCY1 1934 aaKnown RBP15.16■□□□□ 0.02
NUP54-217ENST00000514987 SPECC1L-ADORA2AF8WAN1 911 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 IRAK2O43187 625 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 MAGEC1O60732 1142 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 KLHL2O95198 593 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 POMCP01189 267 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 CPA3P15088 417 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 CCR1P32246 355 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 PRKAA2P54646 552 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 NRG1Q02297 640 aaPredicted RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 MPP3Q13368 585 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 UGP2Q16851 508 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 CES4AQ5XG92 561 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 TIGD7Q6NT04 549 aaPredicted RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 C16orf46Q6P387 395 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 ALYREFQ86V81 257 aaKnown RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 KCNMB4Q86W47 210 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 ATPAF2Q8N5M1 289 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 RDH11Q8TC12 318 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 PTCD2Q8WV60 388 aaKnown RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 FCRL5Q96RD9 977 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 PAAF1Q9BRP4 392 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 KIFC1Q9BW19 673 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 SMOC2Q9H3U7 446 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 DENND2DQ9H6A0 471 aaPredicted RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 DNAJC28Q9NX36 388 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 TAS2R1Q9NYW7 299 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 APOBEC2Q9Y235 224 aaKnown RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 TMEM114B3SHH9 223 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 ADAMTS4O75173 837 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 RALBP11234 206 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 ALOX15P16050 662 aaPredicted RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 CST5P28325 142 aaPredicted RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 BRCC3P46736 316 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 HARS2P49590 506 aaKnown RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 RAP1GDS1P52306 607 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 RABGGTBP53611 331 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 GEMP55040 296 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 ABCE1P61221 599 aaKnown RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 RPL10AP62906 217 aaKnown RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 CRHR2Q13324 411 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 RWDD4Q6NW29 188 aaKnown RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 CD300LGQ6UXG3 332 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 TRIB2Q92519 343 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 TSNARE1Q96NA8 513 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 ADAM2Q99965 735 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 CCDC106Q9BWC9 280 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 C1orf21Q9H246 121 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 C20orf96Q9NUD7 363 aaPredicted RBP15.15■□□□□ 0.02
NUP54-217ENST00000514987 DONSONQ9NYP3 566 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 TMEM216Q9P0N5 145 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 SLC17A6Q9P2U8 582 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 DNAJC16Q9Y2G8 782 aa15.15■□□□□ 0.02
NUP54-217ENST00000514987 B2RBV5 119 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 MATN3O15232 486 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 ATP9BO43861 1147 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 MGEA5O60502 916 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 DIAPH2O60879 1101 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 USP12O75317 370 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 AMHP03971 560 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 ASGR1P07306 291 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 TPBGLP0DKB5 382 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 KITP10721 976 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 GNAZP19086 355 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 AOC1P19801 751 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 GCKP35557 465 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 PGM1P36871 562 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 HK2P52789 917 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 IRX4P78413 519 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 LPIN1Q14693 890 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 ANO4Q32M45 955 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 ACCSLQ4AC99 568 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 HSF5Q4G112 596 aaPredicted RBP15.14■□□□□ 0.01
NUP54-217ENST00000514987 PCID2Q5JVF3 399 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 CERCAMQ5T4B2 595 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 FSTL4Q6MZW2 842 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 CES3Q6UWW8 571 aa15.14■□□□□ 0.01
NUP54-217ENST00000514987 RINLQ6ZS11 566 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms