RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ZNF821O75541 412 aaPredicted RBP9.97□□□□□ -0.81
RNF4-221ENST00000513643 LRIG2O94898 1065 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 FAM228BP0C875 321 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 MYBL1P10243 752 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 RHOQP17081 205 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 CD6P30203 668 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 HOXD12P35452 270 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 MPLP40238 635 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 STK19P49842 368 aaPredicted RBP9.97□□□□□ -0.81
RNF4-221ENST00000513643 ARHGAP8P85298 464 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 ARL13BQ3SXY8 428 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 LRRC31Q6UY01 552 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 PRR23CQ6ZRP0 262 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 LPCAT2Q7L5N7 544 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 SLFN11Q7Z7L1 901 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 CCDC117Q8IWD4 279 aaPredicted RBP9.97□□□□□ -0.81
RNF4-221ENST00000513643 TMEFF1Q8IYR6 380 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 ZNF366Q8N895 744 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 DCAF4L2Q8NA75 395 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 C1orf216Q8TAB5 229 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 DNASE2BQ8WZ79 361 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 PRCCQ92733 491 aaPredicted RBP9.97□□□□□ -0.81
RNF4-221ENST00000513643 RMDN1Q96DB5 314 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 SPACA7Q96KW9 195 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 RPL10LQ96L21 214 aaKnown RBP9.97□□□□□ -0.81
RNF4-221ENST00000513643 TRIM7Q9C029 511 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 ZYG11BQ9C0D3 744 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 PCED1AQ9H1Q7 454 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 NOL6Q9H6R4 1146 aaKnown RBP9.97□□□□□ -0.81
RNF4-221ENST00000513643 VPS45Q9NRW7 570 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 SEPT11Q9NVA2 429 aaKnown RBP9.97□□□□□ -0.81
RNF4-221ENST00000513643 TMEM248Q9NWD8 314 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 EVLQ9UI08 416 aaPredicted RBP9.97□□□□□ -0.81
RNF4-221ENST00000513643 PILRBQ9UKJ0 227 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 CHD5Q8TDI0 1954 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 NUMA1Q14980 2115 aa9.97□□□□□ -0.81
RNF4-221ENST00000513643 EDDM13A0A1B0GTR0 161 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 METTL12A8MUP2 240 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 TMCO5BA8MYB1 307 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 ZBTB24O43167 697 aaPredicted RBP9.96□□□□□ -0.82
RNF4-221ENST00000513643 CBFA2T2O43439 604 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 MT-CO1P00395 513 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 CYP1A2P05177 515 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 TPM3P06753 285 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 OXTRP30559 389 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 PCK1P35558 622 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 MAPKAPK2P49137 400 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 LIMK1P53667 647 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 LMNB2Q03252 620 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 ZNF33AQ06730 810 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 TRIM14Q14142 442 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 CDO1Q16878 200 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 C6orf118Q5T5N4 469 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 RNF219Q5W0B1 726 aaPredicted RBP9.96□□□□□ -0.82
RNF4-221ENST00000513643 DCUN1D2Q6PH85 259 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 USP30Q70CQ3 517 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 TMC6Q7Z403 805 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 SYT12Q8IV01 421 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 PSTKQ8IV42 348 aaKnown RBP9.96□□□□□ -0.82
RNF4-221ENST00000513643 PYROXD2Q8N2H3 581 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 PGBD3Q8N328 593 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 SH2D3CQ8N5H7 860 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 RNF214Q8ND24 703 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 OR8K1Q8NGG5 319 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 CPLX3Q8WVH0 158 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 ERLEC1Q96DZ1 483 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 TRIM11Q96F44 468 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 TOE1Q96GM8 510 aaKnown RBP9.96□□□□□ -0.82
RNF4-221ENST00000513643 PEBP4Q96S96 227 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 RXFP3Q9NSD7 469 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 CNOT8Q9UFF9 292 aaKnown RBP9.96□□□□□ -0.82
RNF4-221ENST00000513643 VPS51Q9UID3 782 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 PPM1HQ9ULR3 514 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 SCML1Q9UN30 329 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 CYP8B1Q9UNU6 501 aa9.96□□□□□ -0.82
RNF4-221ENST00000513643 THADAQ6YHU6 1953 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 PI4KAP42356 2102 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 SSU72P8A0A1W2PR75 194 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 EIF3CLB5ME19 914 aaKnown RBP9.95□□□□□ -0.82
RNF4-221ENST00000513643 MCF2LO15068 1137 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 ALOX15BO15296 676 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
RNF4-221ENST00000513643 SNAP91O60641 907 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 SRGAP2O75044 1071 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 LRCH4O75427 683 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 RHOCP08134 193 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 SRCP12931 536 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 VAV1P15498 845 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 ITPKAP23677 461 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 OR1E1P30953 314 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 HTR7P34969 479 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 DPP6P42658 865 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 CLCN6P51797 869 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 ST8SIA6P61647 398 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 ARF5P84085 180 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 RPL6Q02878 288 aaKnown RBP9.95□□□□□ -0.82
RNF4-221ENST00000513643 GNA12Q03113 381 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 SLC20A2Q08357 652 aa9.95□□□□□ -0.82
RNF4-221ENST00000513643 ELAVL3Q14576 367 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms