RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 GOLPH3LQ9H4A5 285 aa7.49□□□□□ -1.21
USP46-208ENST00000512656 FBRSQ9HAH7 460 aa7.49□□□□□ -1.21
USP46-208ENST00000512656 METTL14Q9HCE5 456 aaKnown RBP7.49□□□□□ -1.21
USP46-208ENST00000512656 ABCC13Q9NSE7 274 aa7.49□□□□□ -1.21
USP46-208ENST00000512656 WSB2Q9NYS7 404 aaPredicted RBP7.49□□□□□ -1.21
USP46-208ENST00000512656 USP36Q9P275 1121 aaKnown RBP7.49□□□□□ -1.21
USP46-208ENST00000512656 TSPAN16Q9UKR8 245 aa7.49□□□□□ -1.21
USP46-208ENST00000512656 PLA2G4CQ9UP65 541 aa7.49□□□□□ -1.21
USP46-208ENST00000512656 ZDHHC9Q9Y397 364 aa7.49□□□□□ -1.21
USP46-208ENST00000512656 COQ4Q9Y3A0 265 aa7.49□□□□□ -1.21
USP46-208ENST00000512656 SPAARA0A1B0GVQ0 90 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 PDE2AO00408 941 aaPredicted RBP7.48□□□□□ -1.21
USP46-208ENST00000512656 EIF4EBP3O60516 100 aaPredicted RBP7.48□□□□□ -1.21
USP46-208ENST00000512656 EPHX1P07099 455 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 C1QTNF9P0C862 333 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 SPINK2P20155 84 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 PPP1R2P41236 205 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 IL12RB1P42701 662 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 PRCPP42785 496 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 CD97P48960 835 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 TPMTP51580 245 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 ADIGQ0VDE8 80 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 PNOCQ13519 176 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 ZNF234Q14588 700 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 STILQ15468 1287 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 GOLGA7BQ2TAP0 167 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 ADGRF1Q5T601 910 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 ZNF658Q5TYW1 1059 aaPredicted RBP7.48□□□□□ -1.21
USP46-208ENST00000512656 BSPRYQ5W0U4 402 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 ANKRD34AQ69YU3 496 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 IL27RAQ6UWB1 636 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 FMNL3Q8IVF7 1028 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 UNC45BQ8IWX7 931 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 SMYD4Q8IYR2 804 aaPredicted RBP7.48□□□□□ -1.21
USP46-208ENST00000512656 SCML4Q8N228 414 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 TMEM102Q8N9M5 508 aaPredicted RBP7.48□□□□□ -1.21
USP46-208ENST00000512656 NBEAQ8NFP9 2946 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 KNL1Q8NG31 2342 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 OR2T3Q8NH03 318 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 KCTD13Q8WZ19 329 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 DNASE2BQ8WZ79 361 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 IRGQQ8WZA9 623 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 GOLGA1Q92805 767 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 SMARCE1Q969G3 411 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 TMA16Q96EY4 203 aaKnown RBP7.48□□□□□ -1.21
USP46-208ENST00000512656 EEF2KMTQ96G04 330 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 ARID3AQ99856 593 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 DDX50Q9BQ39 737 aaKnown RBP7.48□□□□□ -1.21
USP46-208ENST00000512656 MKRN2Q9H000 416 aaKnown RBP7.48□□□□□ -1.21
USP46-208ENST00000512656 MIR1-1HGQ9H1L0 117 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 SLC6A17Q9H1V8 727 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 FSCN3Q9NQT6 498 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 CNGB3Q9NQW8 809 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 MSRB2Q9Y3D2 182 aa7.48□□□□□ -1.21
USP46-208ENST00000512656 TYW5A2RUC4 315 aaKnown RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 METTL12A8MUP2 240 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 PSMA7O14818 248 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 PMM2O15305 246 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 BCAT2O15382 392 aaPredicted RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 IRAK2O43187 625 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 TSPAN3O60637 253 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 FBXO21O94952 628 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 CER1O95813 267 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 IGLV3-19P01714 112 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 ATP5BP06576 529 aaKnown RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 PAEPP09466 180 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 ZNF883P0CG24 379 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 CD59P13987 128 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 MPSTP25325 297 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 HOXD9P28356 352 aaPredicted RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 SLC11A2P49281 568 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 ARL4DP49703 201 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 ZBTB16Q05516 673 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 GRIK2Q13002 908 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 CAMK2GQ13555 558 aaPredicted RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 TRIP6Q15654 476 aaKnown RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 CBWD6Q4V339 395 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 FNDC3BQ53EP0 1204 aaKnown RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 CBWD3Q5JTY5 395 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 CBWD5Q5RIA9 395 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 NUGGCQ68CJ6 796 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 LCLAT1Q6UWP7 414 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 NAXDQ8IW45 347 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 CCDC117Q8IWD4 279 aaPredicted RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 ZC3H3Q8IXZ2 948 aaKnown RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 AHI1Q8N157 1196 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 ZCCHC9Q8N567 271 aaKnown RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 GATA6Q92908 595 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 UTP4Q969X6 686 aaKnown RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 SLC35C1Q96A29 364 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 KLHDC7BQ96G42 594 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 NT5C1BQ96P26 610 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 PCMTD2Q9NV79 361 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 SUN2Q9UH99 717 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 STOML2Q9UJZ1 356 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 SOX13Q9UN79 622 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 APOBEC2Q9Y235 224 aaKnown RBP7.47□□□□□ -1.21
USP46-208ENST00000512656 HIF3AQ9Y2N7 669 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 ZFHX4Q86UP3 3567 aa7.47□□□□□ -1.21
USP46-208ENST00000512656 FREM2Q5SZK8 3169 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms