RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 STK38LQ9Y2H1 464 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZHX2Q9Y6X8 837 aa6.48□□□□□ -1.37
TRAPPC11-209ENST00000512476 SENP3-EIF4A1A0A087X0R7 540 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 ALBP02768 609 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 RPSAP08865 295 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 EPORP19235 508 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 CD40P25942 277 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 PRKAR1BP31321 381 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 RING1Q06587 406 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 POU4F2Q12837 409 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 CRY1Q16526 586 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 KIZQ2M2Z5 673 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 TWISTNBQ3B726 338 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 TBC1D25Q3MII6 688 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 TADA2BQ86TJ2 420 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 PHYKPLQ8IUZ5 450 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 CCDC28AQ8IWP9 274 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 ULK2Q8IYT8 1036 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 MAML2Q8IZL2 1156 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 OR8J1Q8NGP2 316 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 POC1BQ8TC44 478 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 MTFMTQ96DP5 389 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 ITPKCQ96DU7 683 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 MASTLQ96GX5 879 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 BTBD6Q96KE9 485 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 DGAT2Q96PD7 388 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 GAD1Q99259 594 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 HEMGNQ9BXL5 484 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 CPEB1Q9BZB8 566 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 SMG9Q9H0W8 520 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 VCX3BQ9H321 246 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 POLR1BQ9H9Y6 1135 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 FSCN3Q9NQT6 498 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 CENPMQ9NSP4 180 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 ABCB8Q9NUT2 735 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 GFOD1Q9NXC2 390 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 C3P01024 1663 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 KDM5AP29375 1690 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM90A20PA6NIJ5 464 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 PSMD9O00233 223 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 BTN3A1O00481 513 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 TO15178 435 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 SOX18P35713 384 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 LTBRP36941 435 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 EPHB3P54753 998 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 XIAPP98170 497 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 KCNAB2Q13303 367 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 DDX39BQ13838 428 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 USH1GQ495M9 461 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 PLA1AQ53H76 456 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 TTC22Q5TAA0 569 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 INO80CQ6PI98 192 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLC36A4Q6YBV0 504 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 AACSQ86V21 672 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 VASH2Q86V25 355 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 REXO1L1PQ8IX06 675 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 HACE1Q8IYU2 909 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZNF679Q8IYX0 411 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM185AQ8N0U4 392 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 RDM1Q8NG50 284 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 ALG14Q96F25 216 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 HNRNPABQ99729 332 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 MYL10Q9BUA6 226 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 BBS2Q9BXC9 721 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 KCNH6Q9H252 994 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 GPAMQ9HCL2 828 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMEM8AQ9HCN3 771 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM114A2Q9NRY5 505 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 NDUFAF4Q9P032 175 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 DNAJB11Q9UBS4 358 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 MTMR6Q9Y217 621 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 CHKBQ9Y259 395 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 STRAPQ9Y3F4 350 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 NFS1Q9Y697 457 aa6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 EIF3AQ14152 1382 aaKnown RBP6.47□□□□□ -1.37
TRAPPC11-209ENST00000512476 SOX1O00570 391 aaPredicted RBP6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 URODP06132 367 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 TUBG1P23258 451 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 LONP1P36776 959 aaKnown RBP6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 ABATP80404 500 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 CYP27C1Q4G0S4 372 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 CATSPEREQ5SY80 951 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 HHATQ5VTY9 493 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 PDPK2PQ6A1A2 396 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 MIS18BP1Q6P0N0 1132 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 THSD4Q6ZMP0 1018 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 DNAAF5Q86Y56 855 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 DDIASQ8IXT1 998 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 WNT8BQ93098 351 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 SMARCE1Q969G3 411 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 KIAA1143Q96AT1 154 aaPredicted RBP6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 MCRS1Q96EZ8 462 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 THOC1Q96FV9 657 aaKnown RBP6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 GORASP1Q9BQQ3 440 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 CDK19Q9BWU1 502 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 TBC1D10AQ9BXI6 508 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 TMEM117Q9H0C3 514 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 LY9Q9HBG7 655 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms