RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 EXTL1Q92935 676 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 APOBEC3GQ9HC16 384 aaKnown RBP11.95□□□□□ -0.5
RNF4-216ENST00000511859 PREBQ9HCU5 417 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 SLC39A2Q9NP94 309 aa11.95□□□□□ -0.5
RNF4-216ENST00000511859 UNC13CQ8NB66 2214 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.94□□□□□ -0.5
RNF4-216ENST00000511859 PVALEFA0A1B0GWK0 134 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 EME2A4GXA9 379 aaPredicted RBP11.94□□□□□ -0.5
RNF4-216ENST00000511859 YJEFN3A6XGL0 299 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 E7ENQ6 273 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 XPO1O14980 1071 aaKnown RBP11.94□□□□□ -0.5
RNF4-216ENST00000511859 MSI1O43347 362 aaKnown RBP11.94□□□□□ -0.5
RNF4-216ENST00000511859 IGLV3-27P01718 113 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 MYF5P13349 255 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 CTSOP43234 321 aaPredicted RBP11.94□□□□□ -0.5
RNF4-216ENST00000511859 SULT2A1Q06520 285 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 ZNF177Q13360 481 aaPredicted RBP11.94□□□□□ -0.5
RNF4-216ENST00000511859 POM121L1PQ3SYA9 428 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 FSCBQ5H9T9 825 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 FOXR1Q6PIV2 292 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 SCML4Q8N228 414 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 IQUBQ8NA54 791 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 RPL10LQ96L21 214 aaKnown RBP11.94□□□□□ -0.5
RNF4-216ENST00000511859 CA5BQ9Y2D0 317 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 COL27A1Q8IZC6 1860 aaPredicted RBP11.94□□□□□ -0.5
RNF4-216ENST00000511859 ICE1Q9Y2F5 2266 aa11.94□□□□□ -0.5
RNF4-216ENST00000511859 CCDC187A0A096LP49 1063 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 SLC31A1O15431 190 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 PPFIA2O75334 1257 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 LUC7L3O95232 432 aaKnown RBP11.93□□□□□ -0.5
RNF4-216ENST00000511859 CR2P20023 1033 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 RPS24P62847 133 aaKnown RBP11.93□□□□□ -0.5
RNF4-216ENST00000511859 TLE1Q04724 770 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 CCDC15Q0P6D6 951 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 SLC12A1Q13621 1099 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 C1orf220Q5T0J3 134 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 AGBL4Q5VU57 503 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 MSANTD2Q6P1R3 559 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 MMS22LQ6ZRQ5 1243 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 SLC4A11Q8NBS3 891 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 OR8D1Q8WZ84 308 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 SRRTQ9BXP5 876 aaKnown RBP11.93□□□□□ -0.5
RNF4-216ENST00000511859 CALN1Q9BXU9 219 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 SLC25A18Q9H1K4 315 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 MAGEF1Q9HAY2 307 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 CNGB3Q9NQW8 809 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 DACH1Q9UI36 760 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 SALL4Q9UJQ4 1053 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 PPM1HQ9ULR3 514 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 FRMD4BQ9Y2L6 1034 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 PCDHGA7Q9Y5G6 932 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 CSNK1G3Q9Y6M4 447 aa11.93□□□□□ -0.5
RNF4-216ENST00000511859 CPED1A4D0V7 1026 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 C1QTNF3-AMACRE9PGA6 284 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 PDXKO00764 312 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 MAPK13O15264 365 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 ALOX15BO15296 676 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 FAM87AP0C7U9 286 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 PDCP20941 246 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 AKT2P31751 481 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 VAMP7P51809 220 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 RAD23BP54727 409 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 TBX4P57082 545 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 ADIGQ0VDE8 80 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 CNTN1Q12860 1018 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 CDKN3Q16667 212 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 C4orf17Q53FE4 359 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 MS4A13Q5J8X5 152 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 EFL1Q7Z2Z2 1120 aaKnown RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 C14orf80Q86SX3 495 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 SIX6OS1Q8N1H7 587 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 TAS1R2Q8TE23 839 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 KCTD13Q8WZ19 329 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 ARRDC3Q96B67 414 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 DHX58Q96C10 678 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 PRICKLE1Q96MT3 831 aaPredicted RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 CISHQ9NSE2 258 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 WDR70Q9NW82 654 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 DNAJC28Q9NX36 388 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 ACSL6Q9UKU0 697 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 SARDHQ9UL12 918 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 HS3ST3A1Q9Y663 406 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 RP1L1Q8IWN7 2480 aaPredicted RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 UTP20O75691 2785 aaKnown RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 H3BM21 787 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 TMX2-CTNND1H3BSU7 103 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 TULP2O00295 520 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 TPP1O14773 563 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 MCF2LO15068 1137 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 NEBLO76041 1014 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 CSF2P04141 144 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 ZNF18P17022 549 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 HNRNPA2B1P22626 353 aaKnown RBP11.92□□□□□ -0.5
RNF4-216ENST00000511859 SLC5A2P31639 672 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 AFMP43652 599 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 GCLMP48507 274 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 PLK1P53350 603 aa11.92□□□□□ -0.5
RNF4-216ENST00000511859 METAP1P53582 386 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms