RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 BMP10O95393 424 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ACSL3O95573 720 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 IFNA1P01562 189 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ENO3P13929 434 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 ZNF14P17017 642 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 PPIBP23284 216 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 DDX6P26196 483 aaKnown RBP eCLIP3.63□□□□□ -1.83
USP53-205ENST00000509769 PMLP29590 882 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 CMPK1P30085 196 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 SLC6A4P31645 630 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 FDFT1P37268 417 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ALDH3B2P48448 385 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 GPC3P51654 580 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 MAZP56270 477 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 NME5P56597 212 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 CABP4P57796 275 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 DSTNP60981 165 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ACTR3P61158 418 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 RANP62826 216 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 YWHAZP63104 245 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 CDK16Q00536 496 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 KDSRQ06136 332 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 PRKAA1Q13131 559 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 RAPSNQ13702 412 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 PRKD1Q15139 912 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 BRDTQ58F21 947 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 RABL3Q5HYI8 236 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 CCNYL2Q5T2Q4 361 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 C6orf183Q5T699 404 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 INTS11Q5TA45 600 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 FAM91A1Q658Y4 838 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 AFTPHQ6ULP2 937 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 TIPARPQ7Z3E1 657 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 TTC7BQ86TV6 843 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 KBTBD6Q86V97 674 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ATCAYQ86WG3 371 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 CIR1Q86X95 450 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 OR6Q1Q8NGQ2 317 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 OR8K5Q8NH50 307 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 NSMCE2Q96MF7 247 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 GON7Q9BXV9 100 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 WDR11Q9BZH6 1224 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 OR10A4Q9H209 315 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 SLC9A2Q9UBY0 812 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 DDX20Q9UHI6 824 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 SFMBT1Q9UHJ3 866 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 SH3BGRL2Q9UJC5 107 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ST3GAL5Q9UNP4 418 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 RPH3AQ9Y2J0 694 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 NR2E1Q9Y466 385 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ITSN1Q15811 1721 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 MEN1O00255 615 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 BTN3A1O00481 513 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 MAP2K7O14733 419 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 PER2O15055 1255 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 GRID2O43424 1007 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 GMDSO60547 372 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 MRPS14O60783 128 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 IPO13O94829 963 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 CCNDBP1O95273 360 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 RBP1P09455 135 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 PKLRP30613 574 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 AKT1P31749 480 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 SERPINB5P36952 375 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 RPL3P39023 403 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 STAT3P40763 770 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 CD97P48960 835 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 NRG3P56975 720 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 FLI1Q01543 452 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 MTMR2Q13614 643 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 POLA2Q14181 598 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 MESDQ14696 234 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 TMEM31Q5JXX7 168 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 TBCELQ5QJ74 424 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 AKR1C8PQ5T2L2 129 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 NDUFAF5Q5TEU4 345 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 IZUMO3Q5VZ72 239 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 PGBD2Q6P3X8 592 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 LRRC69Q6ZNQ3 347 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 CEP97Q8IW35 865 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 GSPT2Q8IYD1 628 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 GJD3Q8N144 294 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 MFSD2AQ8NA29 543 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 GOLM1Q8NBJ4 401 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 KCTD6Q8NC69 237 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 DEPTORQ8TB45 409 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 SH3RF3Q8TEJ3 882 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 DPF1Q92782 380 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ZIM3Q96PE6 472 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 SEPT5Q99719 369 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 ERP44Q9BS26 406 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 SPATA16Q9BXB7 569 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 AP1M1Q9BXS5 423 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 RNF26Q9BY78 433 aaPredicted RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 CCSER1Q9C0I3 900 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 NDST4Q9H3R1 872 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 TM9SF3Q9HD45 589 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 ABCB9Q9NP78 766 aa3.63□□□□□ -1.83
USP53-205ENST00000509769 SARS2Q9NP81 518 aaKnown RBP3.63□□□□□ -1.83
USP53-205ENST00000509769 PANK4Q9NVE7 773 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms