RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CNTN1Q12860 1018 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 HES3Q5TGS1 186 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 AGBL4Q5VU57 503 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3GQ6DHY5 549 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3CQ6IPX1 549 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 TBC1D3Q8IZP1 549 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-202ENST00000509637 SLC25A45Q8N413 288 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 BTN2A3PQ96KV6 586 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 SLC2A13Q96QE2 648 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 PSMB7Q99436 277 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 THAP9Q9H5L6 903 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 POPDC2Q9HBU9 364 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 PPM1HQ9ULR3 514 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 CTNND2Q9UQB3 1225 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 SNX10Q9Y5X0 201 aa16.4■□□□□ 0.22
RAB40C-202ENST00000509637 SYNJ2BP-COX16A0A087WUM0 186 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 K7ERQ8 282 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 PSMA7O14818 248 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 PLRG1O43660 514 aaKnown RBP16.39■□□□□ 0.21
RAB40C-202ENST00000509637 ATP9BO43861 1147 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 SDC3O75056 442 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 GADD45BO75293 160 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-202ENST00000509637 RFPL3O75679 317 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 JUPP14923 745 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 SLC9A1P19634 815 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 EIF2S3P41091 472 aaKnown RBP16.39■□□□□ 0.21
RAB40C-202ENST00000509637 ACADSBP45954 432 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 PDCLQ13371 301 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 NAPEPLDQ6IQ20 393 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 ZNF683Q8IZ20 524 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 ZNF557Q8N988 423 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-202ENST00000509637 MFSD2AQ8NA29 543 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 PIP4K2CQ8TBX8 421 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 KLK6Q92876 244 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 FEM1AQ9BSK4 669 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 CRACR2AQ9BSW2 395 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 SRRTQ9BXP5 876 aaKnown RBP16.39■□□□□ 0.21
RAB40C-202ENST00000509637 GTPBP4Q9BZE4 634 aaKnown RBP16.39■□□□□ 0.21
RAB40C-202ENST00000509637 PRORYQ9H606 182 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 GDF3Q9NR23 364 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 TMPRSS4Q9NRS4 437 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 COX16Q9P0S2 106 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
RAB40C-202ENST00000509637 SNAP91O60641 907 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 CNTN5O94779 1100 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 ADH1BP00325 375 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 APOEP02649 317 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 MYF5P13349 255 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 ABCB4P21439 1286 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 SEMG2Q02383 582 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 AUHQ13825 339 aaKnown RBP16.38■□□□□ 0.21
RAB40C-202ENST00000509637 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
RAB40C-202ENST00000509637 RTP5Q14D33 572 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 DLG2Q15700 870 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 PROX2Q3B8N5 592 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 DPY19L2P1Q6NXN4 242 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 Q6ZVU0 165 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 IRF2BP1Q8IU81 584 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 ARRDC3Q96B67 414 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 NOX5Q96PH1 765 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 ERVMER34-1Q9H9K5 563 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■■■□□ 16.2
RAB40C-202ENST00000509637 UCKL1Q9NWZ5 548 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 CEP83Q9Y592 693 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 HS3ST4Q9Y661 456 aa16.38■□□□□ 0.21
RAB40C-202ENST00000509637 F5H5T6 163 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 CAPN9O14815 690 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 THAP12O43422 761 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 MOCS3O95396 460 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 AFPP02771 609 aaKnown RBP16.37■□□□□ 0.21
RAB40C-202ENST00000509637 ERBB2P04626 1255 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 PNMA6AP0CW24 399 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-202ENST00000509637 VASPP50552 380 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-202ENST00000509637 INSM1Q01101 510 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-202ENST00000509637 C5orf22Q49AR2 442 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 ALFQ53S48 1182 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 PIP5KL1Q5T9C9 394 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 FOXR2Q6PJQ5 311 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 PCSK4Q6UW60 755 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 FAM183BPQ6ZVS7 135 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 PASD1Q8IV76 773 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 ELOA2Q8IYF1 753 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-202ENST00000509637 ATP6V0D2Q8N8Y2 350 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 SPAG5Q96R06 1193 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 MYOCQ99972 504 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 SIX2Q9NPC8 291 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 VANGL2Q9ULK5 521 aa16.37■□□□□ 0.21
RAB40C-202ENST00000509637 A0A1B0GVM2 712 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 FAM170AA1A519 330 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 TYW5A2RUC4 315 aaKnown RBP16.36■□□□□ 0.21
RAB40C-202ENST00000509637 TCAF2A6NFQ2 919 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 E9PAM4 449 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 MCF2LO15068 1137 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 SART1O43290 800 aaKnown RBP16.36■□□□□ 0.21
RAB40C-202ENST00000509637 SMAD6O43541 496 aaKnown RBP16.36■□□□□ 0.21
RAB40C-202ENST00000509637 SIGLEC6O43699 453 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 PAGE1O75459 146 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 ADCY5O95622 1261 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 SRCP12931 536 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 PRLRP16471 622 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms