RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 AGAP2Q99490 1192 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 IL22Q9GZX6 179 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 C20orf96Q9NUD7 363 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 MYBPHLA2RUH7 354 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 MEI4A8MW99 385 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 NFKB1P19838 968 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 CD68P34810 354 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 CSE1LP55060 971 aaKnown RBP18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 GALNT2Q10471 571 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 CERCAMQ5T4B2 595 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 GPRIN1Q7Z2K8 1008 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 RSPH3Q86UC2 560 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 KCNMB4Q86W47 210 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 MYLK4Q86YV6 388 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 TNS4Q8IZW8 715 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 CMTM5Q96DZ9 223 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 SPON1Q9HCB6 807 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 GPAMQ9HCL2 828 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 DNAJB4Q9UDY4 337 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 PCDHB12Q9Y5F1 795 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 WASF2Q9Y6W5 498 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 ZNF236Q9UL36 1845 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 ARHGAP42A6NI28 874 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 I6L893 689 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 HSPA4LO95757 839 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 ANPEPP15144 967 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 NCF2P19878 526 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 ZBTB17Q13105 803 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 MPP3Q13368 585 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 PLD6Q8N2A8 252 aaKnown RBP18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 URGCPQ8TCY9 931 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 AZIN2Q96A70 460 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 MFSD3Q96ES6 412 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 MLPHQ9BV36 600 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 OR12D3Q9UGF7 316 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 CDH9Q9ULB4 789 aa18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 TIMM13Q9Y5L4 95 aaPredicted RBP18.31■□□□□ 0.52
CCHCR1-228ENST00000509552 FKBP6O75344 327 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 H2AFYO75367 372 aaKnown RBP18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 THP07101 528 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 ZNF865P0CJ78 1059 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 YBX3P16989 372 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 IGFBP6P24592 240 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 SLC25A3Q00325 362 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 BEX3Q00994 111 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 MAP2K5Q13163 448 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 FSCBQ5H9T9 825 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 ZMIZ2Q8NF64 920 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 OR6Y1Q8NGX8 325 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 SMARCD1Q96GM5 515 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 TKTL2Q9H0I9 626 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 CACNG4Q9UBN1 327 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 MID2Q9UJV3 735 aa18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 MAGED2Q9UNF1 606 aaPredicted RBP18.3■□□□□ 0.52
CCHCR1-228ENST00000509552 A0A088AWK7 358 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 IQCA1LA6NCM1 817 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 TMEM114B3SHH9 223 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 M0QZ92 97 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 SKAP2O75563 359 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 ARRB2P32121 409 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 GMPRP36959 345 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 HADHAP40939 763 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 CDH17Q12864 832 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 NAPEPLDQ6IQ20 393 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 ATG14Q6ZNE5 492 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 POU5F2Q8N7G0 328 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 EDEM1Q92611 657 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 FAM136AQ96C01 138 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 TEKT5Q96M29 485 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 ZNF184Q99676 751 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 NMRAL1Q9HBL8 299 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 CHRAC1Q9NRG0 131 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 NDE1Q9NXR1 346 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 NSMCE4AQ9NXX6 385 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 TRIP12Q14669 1992 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 ZNF195O14628 629 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 PSMD3O43242 534 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 AMHP03971 560 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 C2P06681 752 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 CXCR3P49682 368 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 CLCNKBP51801 687 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 COG7P83436 770 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 RNF34Q969K3 372 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 APOL2Q9BQE5 337 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 CDH19Q9H159 772 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 VCXQ9H320 206 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 CAB39LQ9H9S4 337 aa18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 IARS2Q9NSE4 1012 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-228ENST00000509552 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 TRIM13O60858 407 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 JCHAINP01591 159 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 APOA4P06727 396 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 DNAJB2P25686 324 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 PCSK1P29120 753 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 CACNA2D1P54289 1103 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 LBRQ14739 615 aaKnown RBP18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 MORN1Q5T089 497 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 TMCO4Q5TGY1 634 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 VWA5B1Q5TIE3 1220 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms