RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PTPN20Q4JDL3 420 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 SLC45A4Q5BKX6 768 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 FAM46CQ5VWP2 391 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 SMYD5Q6GMV2 418 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 CXorf57Q6NSI4 855 aaKnown RBP15.83■□□□□ 0.12
TPM3-219ENST00000509409 CCNI2Q6ZMN8 369 aaPredicted RBP15.83■□□□□ 0.12
TPM3-219ENST00000509409 SLC26A9Q7LBE3 791 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 DSG4Q86SJ6 1040 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 ZDHHC17Q8IUH5 632 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 FAM71AQ8IYT1 594 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 OR8D1Q8WZ84 308 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 SERAC1Q96JX3 654 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 SPAG5Q96R06 1193 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 FEM1AQ9BSK4 669 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 TKTL2Q9H0I9 626 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 MUC3BQ9H195 1237 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 EBF2Q9HAK2 575 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 RRN3Q9NYV6 651 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 VPS28Q9UK41 221 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 CFAP47Q6ZTR5 3102 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 FAM170AA1A519 330 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 TNFSF14O43557 240 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 PCDHGA12O60330 932 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 ADCY5O95622 1261 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 SULT1E1P49888 294 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 ADPRHP54922 357 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 CDH4P55283 916 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 KRT83P78385 493 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 DEUP1Q05D60 604 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 DLG2Q15700 870 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 POM121L1PQ3SYA9 428 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 TAF3Q5VWG9 929 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 LRRC31Q6UY01 552 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 PRPF39Q86UA1 669 aaKnown RBP15.82■□□□□ 0.12
TPM3-219ENST00000509409 ERICH1Q86X53 443 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 ZNF397Q8NF99 534 aaPredicted RBP15.82■□□□□ 0.12
TPM3-219ENST00000509409 BAHD1Q8TBE0 780 aaPredicted RBP15.82■□□□□ 0.12
TPM3-219ENST00000509409 FRS2Q8WU20 508 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 C18orf8Q96DM3 657 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 TPX2Q9ULW0 747 aaKnown RBP15.82■□□□□ 0.12
TPM3-219ENST00000509409 STAP1Q9ULZ2 295 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 FARP1Q9Y4F1 1045 aaPredicted RBP15.82■□□□□ 0.12
TPM3-219ENST00000509409 ASPMQ8IZT6 3477 aa15.82■□□□□ 0.12
TPM3-219ENST00000509409 A0A1B0GTQ1 180 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 C1QTNF3-AMACRE9PGA6 284 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 PLK4O00444 970 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 ATP9BO43861 1147 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 F9P00740 461 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 WNT1P04628 370 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 ITGAVP06756 1048 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 RHOCP08134 193 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 ERCC5P28715 1186 aaPredicted RBP15.81■□□□□ 0.12
TPM3-219ENST00000509409 IRAK1P51617 712 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 KCNJ12Q14500 433 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 BRMS1LQ5PSV4 323 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 KLHDC7AQ5VTJ3 777 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 GATAD2AQ86YP4 633 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 KNL1Q8NG31 2342 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 ALG14Q96F25 216 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 ELF4Q99607 663 aaPredicted RBP15.81■□□□□ 0.12
TPM3-219ENST00000509409 CCDC86Q9H6F5 360 aaKnown RBP15.81■□□□□ 0.12
TPM3-219ENST00000509409 GDF3Q9NR23 364 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 PIGVQ9NUD9 493 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 FTSJ1Q9UET6 329 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 SARDHQ9UL12 918 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 PAXBP1Q9Y5B6 917 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 SNX10Q9Y5X0 201 aa15.81■□□□□ 0.12
TPM3-219ENST00000509409 MUC22E2RYF6 1773 aaPredicted RBP15.8■□□□□ 0.12
TPM3-219ENST00000509409 WNT9AO14904 365 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 RTN2O75298 545 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 CNTN5O94779 1100 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 CYP11B1P15538 503 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 MAT2AP31153 395 aaKnown RBP15.8■□□□□ 0.12
TPM3-219ENST00000509409 DRD3P35462 400 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 CXCR3P49682 368 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 VASPP50552 380 aaPredicted RBP15.8■□□□□ 0.12
TPM3-219ENST00000509409 METAP1P53582 386 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 KCNMA1Q12791 1236 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 DPCR1Q3MIW9 517 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 MIIPQ5JXC2 388 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 FAM102AQ5T9C2 384 aaPredicted RBP15.8■□□□□ 0.12
TPM3-219ENST00000509409 Q6ZVU0 165 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 TMPRSS7Q7RTY8 843 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 ATP11CQ8NB49 1132 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 MSANTD4Q8NCY6 345 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 OR52K2Q8NGK3 314 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 PIP4K2CQ8TBX8 421 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 NPY6RQ99463 290 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 NUP62CLQ9H1M0 184 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 KDM4CQ9H3R0 1056 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 TOR4AQ9NXH8 423 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 ARHGEF38Q9NXL2 777 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 FHOD1Q9Y613 1164 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 AKAP13Q12802 2813 aa15.8■□□□□ 0.12
TPM3-219ENST00000509409 IGF2RP11717 2491 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 A0A1W2PR77 199 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 GOLGA8SH3BPF8 625 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 TLR4O00206 839 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 TAF4O00268 1085 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 MCF2LO15068 1137 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms